PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0813.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WOX

Protein Properties

Length: 419aa MW: 46523.2 Da PI: 6.8217

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0813.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	68.7	7.5e-22	119	178	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psa+++++++++l +++ ++V++WFqN++a+e++ Kaladp0095s0813.1.p 119 SRWNPTPEQLRALEELYRRgTRTPSADQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 178 8***************99************************************97 PP
2	Wus_type_Homeobox	115.4	2.7e-37	117	180	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+PtpeQ++ Leely++G+rtP++++iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ Kaladp0095s0813.1.p 117 SSSRWNPTPEQLRALEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 180 579***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MWMMGYTNPA TAIPENNGGG GGNDQFGGSS MMGIMSPDSF NGRKLRPLIP RPSASAIPTH 60 PTCFNHTNCD TASNFFTLNH HMAAAASHHH LVGVEEQAGK RESFMSGHQH HQSVVVSSSR 120 WNPTPEQLRA LEELYRRGTR TPSADQIQHI TAQLRRYGKI EGKNVFYWFQ NHKARERQKR 180 RRQQLENSSS SPNHQQQSSH NHLHQDQQPK DQPSGDLSNH NDNKGTTGFE IEQTKLWPAP 240 ANCSTLADQG SVHRTEKATA GLAAAAAAAE CVTDDEWVQF QDHHNSLQIA STAATTMLQD 300 TNDTAGEHRR RRTSLNLLLT KNATWDSSHH LSLPTPSAAC SFFKPATVHQ ISMLNNEDIE 360 DENSDQCSKE GGLTLELFPL RSNGAMDFIK DDEDEIKATH STPFQFFEFL PLKNSNAN*

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MWMMGYTNPA TAIPENNGGG GGNDQFGGSS MMGIMSPDSF NGRKLRPLIP RPSASAIPTH  60
PTCFNHTNCD TASNFFTLNH HMAAAASHHH LVGVEEQAGK RESFMSGHQH HQSVVVSSSR  120
WNPTPEQLRA LEELYRRGTR TPSADQIQHI TAQLRRYGKI EGKNVFYWFQ NHKARERQKR  180
RRQQLENSSS SPNHQQQSSH NHLHQDQQPK DQPSGDLSNH NDNKGTTGFE IEQTKLWPAP  240
ANCSTLADQG SVHRTEKATA GLAAAAAAAE CVTDDEWVQF QDHHNSLQIA STAATTMLQD  300
TNDTAGEHRR RRTSLNLLLT KNATWDSSHH LSLPTPSAAC SFFKPATVHQ ISMLNNEDIE  360
DENSDQCSKE GGLTLELFPL RSNGAMDFIK DDEDEIKATH STPFQFFEFL PLKNSNAN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	2e-37	WOX family protein