PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0069s0016.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB_related

Protein Properties

Length: 907aa MW: 101861 Da PI: 9.3662

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0069s0016.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.5	1.3e-07	45	80	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+ E +++++a +++G++ Wk++a+ + R+ +++ Kaladp0069s0016.2.p 45 QWSNKELQQFYEAYRKYGTN-WKKVAAAVR-SRSVEMV 80 6***************99.******9.9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 907 aa Download sequence
MAPSRKTGNA NKQSPTANKI VAKKDEEDAK TKQKKRKLGD MLGSQWSNKE LQQFYEAYRK 60 YGTNWKKVAA AVRSRSVEMV EALYSMNRAY LSLPEGTASV AGLIAMVTDH YCVMERSDSE 120 QESNEGRDQE APQKAQKRSR RKFRNSKFKD MDHNLPDHSP SRFVGSTSDC LSLLKANLPG 180 SEPRVVGKRT PRVPVVHTSD KDFWDKNFSA SPGRKFKMNA DDHVAHEIAL ALTKASQKDK 240 SPRISQSNRA SKRKIGNVSS PAKSDDRMHF IEETSAQLQG SARDEIDHQG SMGSIDVDNL 300 RSGSTLRDRE GFGTLDIQKK GLRSNGKKFI AETGNDHLDD MKEACSGTEE QNSSAFSKNR 360 GFENPKQLIS KGQKQRNKKI LFDEDESAAF EALNTLADLS LTMPEPFLDN DNRGADINTS 420 SAKSKGNNSF GGDEDTTIKF ISSDRGGNVG TIPDSEDKTG IRKRKPKSLP FCMENLKMEP 480 HLYHTGNFPN SEDVEHANKS LSKGHHKEGE HVNASTLNVS RESEGDFSSK NRNWRKRDLP 540 KSVNLKDTNY SVQVESGRPT DGILNLKAKL ANCLSWRKAR RWCTFEWFYS AIDYPWFARR 600 EFVEYLDHVG LGHIPRLTRV EWGVIRSSLG KPRRFSQQFL KEEKEKLNQY RESVRNHYTE 660 LRLGAREGLP TDLARPLSVG QRVIAIHPKT REVHDGSVLT VDRSRCHVQF DKPDLGVEFV 720 MDIDCMPLNP LENMPASLAI NKLSENHNGV KLNGLTSHHS ASLHPNGNID KPDDPLLRPW 780 SDSLVDNSKK TVKDNIPSSN VQAKARSSGP ISGQEAADQP SFLAQSKEAD VKALYEMTCA 840 LDKKEAIVSE FKRMNDEVEE NKRLDSLFEV PESFSKRYAS VLVQLDEVND QASILSFMIH 900 KLLLSF*

Sequence ? help Back to Top

Protein Sequence Length: 907 aa Download sequence

MAPSRKTGNA NKQSPTANKI VAKKDEEDAK TKQKKRKLGD MLGSQWSNKE LQQFYEAYRK  60
YGTNWKKVAA AVRSRSVEMV EALYSMNRAY LSLPEGTASV AGLIAMVTDH YCVMERSDSE  120
QESNEGRDQE APQKAQKRSR RKFRNSKFKD MDHNLPDHSP SRFVGSTSDC LSLLKANLPG  180
SEPRVVGKRT PRVPVVHTSD KDFWDKNFSA SPGRKFKMNA DDHVAHEIAL ALTKASQKDK  240
SPRISQSNRA SKRKIGNVSS PAKSDDRMHF IEETSAQLQG SARDEIDHQG SMGSIDVDNL  300
RSGSTLRDRE GFGTLDIQKK GLRSNGKKFI AETGNDHLDD MKEACSGTEE QNSSAFSKNR  360
GFENPKQLIS KGQKQRNKKI LFDEDESAAF EALNTLADLS LTMPEPFLDN DNRGADINTS  420
SAKSKGNNSF GGDEDTTIKF ISSDRGGNVG TIPDSEDKTG IRKRKPKSLP FCMENLKMEP  480
HLYHTGNFPN SEDVEHANKS LSKGHHKEGE HVNASTLNVS RESEGDFSSK NRNWRKRDLP  540
KSVNLKDTNY SVQVESGRPT DGILNLKAKL ANCLSWRKAR RWCTFEWFYS AIDYPWFARR  600
EFVEYLDHVG LGHIPRLTRV EWGVIRSSLG KPRRFSQQFL KEEKEKLNQY RESVRNHYTE  660
LRLGAREGLP TDLARPLSVG QRVIAIHPKT REVHDGSVLT VDRSRCHVQF DKPDLGVEFV  720
MDIDCMPLNP LENMPASLAI NKLSENHNGV KLNGLTSHHS ASLHPNGNID KPDDPLLRPW  780
SDSLVDNSKK TVKDNIPSSN VQAKARSSGP ISGQEAADQP SFLAQSKEAD VKALYEMTCA  840
LDKKEAIVSE FKRMNDEVEE NKRLDSLFEV PESFSKRYAS VLVQLDEVND QASILSFMIH  900
KLLLSF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein