PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0016s0082.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WOX | ||||||||
Protein Properties | Length: 259aa MW: 29516.6 Da PI: 6.126 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.3 | 9.5e-22 | 86 | 146 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t++ql++Le+lF + n +ps+++++e++++l +++e++V++WFqNrRa+ k+ Kaladp0016s0082.1.p 86 RQRWTPTPQQLQRLEQLFDQgNGTPSKQKIKEITDELtkhgQISETNVYNWFQNRRARSKR 146 89*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 96.5 | 2.2e-31 | 85 | 148 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp+Q++ Le+l+++G tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq Kaladp0016s0082.1.p 85 ARQRWTPTPQQLQRLEQLFDQGNGTPSKQKIKEITDELTKHGQISETNVYNWFQNRRARSKRKQ 148 789***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEWEKKQTQL AEQNNQAGGG DMYMKVMTDE QMELLRHQIS AYTAISQRLV DMHKTISAQQ 60 DLAGIRLGSL YCDPLMTSAG HKITARQRWT PTPQQLQRLE QLFDQGNGTP SKQKIKEITD 120 ELTKHGQISE TNVYNWFQNR RARSKRKQSV SATHNGDSEV ETEVESPRDK KTKPENIQSF 180 ETSSARLANI YFQNSDVGHD MFHSENGLRS SNDLDHFAVY DNELTNPTFA GFDQFISKIE 240 VPGNFSHFGH DGDYDMIH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 148 | RRARSKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35550.1 | 2e-70 | WOX family protein |