PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66373.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family AP2
Protein Properties Length: 539aa    MW: 58821.6 Da    PI: 7.3621
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.62.3e-11112168155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV++++++gr++A+++d  +     ++ k  + g ++ +e+Aa+a++ a++k++g
  GAY66373.1 112 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 168
                 57*******************4444.2455535555.779999**************98 PP
2AP247.25.7e-15211262155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  GAY66373.1 211 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 262
                 57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MIKTWLRNQP APATGPAPAP AQAEAVSMNG SGGSSAQSLS LSMSTGSQPG SALPLLNANG  60
GLNGVESSCS DNNKQQKTTA GTATAGIDLE SQTGAIEAVP RKSIDTFGQR TSIYRGVTRH  120
RWTGRYEAHL WDNSCRREGQ TRKGRQGGYD KEEKAARAYD LAALKYWGTT TTTNFPISNY  180
EKEVEEMKHM TRQEYVASLR RKSSGFSRGA SIYRGVTRHH QHGRWQARIG RVAGNKDLYL  240
GTFSTQEEAA EAYDIAAIKF RGLNAVTNFD MTRYDVNSIL ESSTLPIGGA AKRLKDAEQA  300
AEMTIDRPTV VADDENMSSQ LTADHGWPAI AAFQQAQAHH HHQHQPYSSL QPFGYGQRIW  360
CKQEQDEFNH QLQLGSNNSN AHNFFQPSVM HNLMNMESSS LEHSCTSNNS VIYNNGDHTN  420
GSYQVGYGSN NNNNNGGFVI PMGTVIASNN DHGFGESDHQ AAAKALAFEN MFSSSTSSSD  480
PYQARNLYYL PQQQSSASLV KAAGAYDNWV PTAVPTLAQR SGNIALCHGA PTFTVWNDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-125AP2 family protein