PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY60129.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 1154aa MW: 128662 Da PI: 9.7295

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY60129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	43	79	3	41
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqck 41 W++ E +++++a + +G++ Wk++a+ + +R+++++ GAY60129.1 43 QWSKGELQRFYEAYRNYGKD-WKKVAAQVR-NRSAEMVE 79 6***************99.*****.**9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 1154 aa Download sequence
MAPTRKSRSV NKRYANEVSP AKDVISPSKS KQKKKLSDKL GPQWSKGELQ RFYEAYRNYG 60 KDWKKVAAQV RNRSAEMVEA LYNMNRAYLS LPEGTASVVG LIAMMTDHYN VMEGSDSERE 120 SNDASEMPRK SQKRKRAKVQ LSASKEDISQ SWSMAATGGC LSLLKRSRID GNQPRAVKKR 180 TPRFPVSYSQ KKDDRDDYIP LNKKDRRSAV DANDDEVAHV AALALTEASQ RGGSPQVSQS 240 PHKKTEHGKS SPVQTWDKMF PPAETAHPDA REALNEEGCP EARILNRRPE NGAYTRARKS 300 LMDMEGVGTV EVHRKGKKFY RKKMKVEEVR HSLSDDEGEA CSGTEEGLSS RKGKVGSEIS 360 NAKNDHLPLQ MQRKRSKKLF FGDESTALNA LQTLADLSLM LPDSTMESES SVQLKEERTA 420 FDIDDKSSAP EETSTSHPKE KIKHLGPKEK ALNTITEAED IIPRKSKLGR YSGNDVETVA 480 EVKEQPEPPN SMSKRKRKSV LSKKISNSEA VTDTHMTRTL ESEAVAEEHN KFASKGKRTS 540 QNSAQSKQWK PGRVLEGSSV NDQNRASIDL VAPTGQAPVA SPASSPTKHQ SRRKMDLKRK 600 LSSKEMKFSE NSLKTQPNKN SLSQEDRLLS MKEKLSGCLS SNMVRRWCTF EWFYSAIDYP 660 WFSNREFVEY LNHVGLGHIP RLTRVEWGVI RSSLGKPRRL SKRFLHDERE KLKQYRESVR 720 KHYAELRTGV REGLPRDLPR PLSVGQRVIA IHPKTRELHD GSVLTIDHDK CRVQFDRPEL 780 GVEFVMDIDS MPSNPLDNMP EALRRQISAD KFSAISKELQ VNGHPNFGSP MLFASDGHLE 840 KAPILPNTLQ KQAKGDMNHA LPQAKSLATD IVSAQQAAYG QLCTVPQIQA REATVRALSE 900 EALLMELKNT NNDILESQNG GESSLKDSEP LKKHIATASS ALLQVRQCNT HPESSRPSWP 960 KHPANVKMLD NSHVSQESGS AVAEIVNGSR LKAHTMVDAA VKAMSSVKEG EDAYTKIGEA 1020 LDHIDKRQLT SDPRVSVIRS PEQVNGSLGH HNHFVSGTCD PQPTNNASGT KLQDVSDKNE 1080 AQIPSELITS CVATLLMIQT CTERHTPADV AQIIDSAVSS LHPCCPQNLP IYREIEMCMG 1140 RIKTQILALI PTSI

Sequence ? help Back to Top

Protein Sequence Length: 1154 aa Download sequence

MAPTRKSRSV NKRYANEVSP AKDVISPSKS KQKKKLSDKL GPQWSKGELQ RFYEAYRNYG  60
KDWKKVAAQV RNRSAEMVEA LYNMNRAYLS LPEGTASVVG LIAMMTDHYN VMEGSDSERE  120
SNDASEMPRK SQKRKRAKVQ LSASKEDISQ SWSMAATGGC LSLLKRSRID GNQPRAVKKR  180
TPRFPVSYSQ KKDDRDDYIP LNKKDRRSAV DANDDEVAHV AALALTEASQ RGGSPQVSQS  240
PHKKTEHGKS SPVQTWDKMF PPAETAHPDA REALNEEGCP EARILNRRPE NGAYTRARKS  300
LMDMEGVGTV EVHRKGKKFY RKKMKVEEVR HSLSDDEGEA CSGTEEGLSS RKGKVGSEIS  360
NAKNDHLPLQ MQRKRSKKLF FGDESTALNA LQTLADLSLM LPDSTMESES SVQLKEERTA  420
FDIDDKSSAP EETSTSHPKE KIKHLGPKEK ALNTITEAED IIPRKSKLGR YSGNDVETVA  480
EVKEQPEPPN SMSKRKRKSV LSKKISNSEA VTDTHMTRTL ESEAVAEEHN KFASKGKRTS  540
QNSAQSKQWK PGRVLEGSSV NDQNRASIDL VAPTGQAPVA SPASSPTKHQ SRRKMDLKRK  600
LSSKEMKFSE NSLKTQPNKN SLSQEDRLLS MKEKLSGCLS SNMVRRWCTF EWFYSAIDYP  660
WFSNREFVEY LNHVGLGHIP RLTRVEWGVI RSSLGKPRRL SKRFLHDERE KLKQYRESVR  720
KHYAELRTGV REGLPRDLPR PLSVGQRVIA IHPKTRELHD GSVLTIDHDK CRVQFDRPEL  780
GVEFVMDIDS MPSNPLDNMP EALRRQISAD KFSAISKELQ VNGHPNFGSP MLFASDGHLE  840
KAPILPNTLQ KQAKGDMNHA LPQAKSLATD IVSAQQAAYG QLCTVPQIQA REATVRALSE  900
EALLMELKNT NNDILESQNG GESSLKDSEP LKKHIATASS ALLQVRQCNT HPESSRPSWP  960
KHPANVKMLD NSHVSQESGS AVAEIVNGSR LKAHTMVDAA VKAMSSVKEG EDAYTKIGEA  1020
LDHIDKRQLT SDPRVSVIRS PEQVNGSLGH HNHFVSGTCD PQPTNNASGT KLQDVSDKNE  1080
AQIPSELITS CVATLLMIQT CTERHTPADV AQIIDSAVSS LHPCCPQNLP IYREIEMCMG  1140
RIKTQILALI PTSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein