PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59758.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 840aa MW: 92491 Da PI: 7.1848

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.7e-09	643	680	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + GAY59758.1 643 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 680 564459******************************87 PP
2	BELL	93.7	1.7e-30	496	565	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+ +akLl l+eeV krYk y++qlq+v+ssFe vagl a+pY+slA kaiS++FrcLk ai++q+ GAY59758.1 496 PEYQEMRAKLLYLQEEVSKRYKLYHQQLQMVVSSFESVAGLSGATPYVSLAFKAISKNFRCLKSAIMNQL 565 6889999************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MDMNNFRPQS SHVAQQSRRD KLRIQQHLED LSEHSNLEQS SSVNVRNGIS FYDSSTTLVS 60 SSELINFSAN SSALTAQREA MGHQELSDSH HQHDQHSNTS RPIMTGGDLF TILPHTAVAS 120 SHHFRGTGDH FQGCCDLKGL DHSQSISEWM VNYASGSSGR ESNQNVMLDG EVVSNNSNST 180 SRKFLRPNNY NEYQDHVQST SVNQPSEKLF GDMHYATPIF PNTVQDVVTL ASVGTHGLEV 240 ASLLQQSNAR ETGHVTWTDH SGNELVLLPS YGNQTSAIRY SDPSNWTSRP AAESFHQWST 300 ESGLRNVASD AATQGLSLSL SSNPPSDEMN AGHFAGGYES QNLHFKTDSR SGNSSLLGSF 360 PKPSIIRKGS GKSVQDMGTS SYNVHRNTGP LGPFTGYATI LKNSRFLKPA QELLDEFCCV 420 KKSKYGRRGN VSERFSGDRA SASASAEADA ADVADREVGA KGKNSTSRVS SPTFYSSNQI 480 SCEGGVGSSS GESHRPEYQE MRAKLLYLQE EVSKRYKLYH QQLQMVVSSF ESVAGLSGAT 540 PYVSLAFKAI SKNFRCLKSA IMNQLKHVAK ALGEEMRSSA TVTSSSRGHI TNTSAKLNCL 600 DQILQKHKSG GANVGFLEPQ QHVWRPQRGL PERAVAILRA WLFEHFLHPY PTDTDKHMLA 660 TQTGLSRNQV SNWFINARVR VWKPMVEEIH MLETQGSVAT NQDFKTKTDG QSLSDGTAGS 720 SFNGDQPMND KLAISAMSDE HMDYSGIGSS RSNNEEGLNA EHWNQEKRSR VDSNHRLTTS 780 MDRSLMGFIP YQRNMIEVGG LSAVSLTLGL RHGVESSPQQ QQEDQLRRQY GGQMIHDFAG

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MDMNNFRPQS SHVAQQSRRD KLRIQQHLED LSEHSNLEQS SSVNVRNGIS FYDSSTTLVS  60
SSELINFSAN SSALTAQREA MGHQELSDSH HQHDQHSNTS RPIMTGGDLF TILPHTAVAS  120
SHHFRGTGDH FQGCCDLKGL DHSQSISEWM VNYASGSSGR ESNQNVMLDG EVVSNNSNST  180
SRKFLRPNNY NEYQDHVQST SVNQPSEKLF GDMHYATPIF PNTVQDVVTL ASVGTHGLEV  240
ASLLQQSNAR ETGHVTWTDH SGNELVLLPS YGNQTSAIRY SDPSNWTSRP AAESFHQWST  300
ESGLRNVASD AATQGLSLSL SSNPPSDEMN AGHFAGGYES QNLHFKTDSR SGNSSLLGSF  360
PKPSIIRKGS GKSVQDMGTS SYNVHRNTGP LGPFTGYATI LKNSRFLKPA QELLDEFCCV  420
KKSKYGRRGN VSERFSGDRA SASASAEADA ADVADREVGA KGKNSTSRVS SPTFYSSNQI  480
SCEGGVGSSS GESHRPEYQE MRAKLLYLQE EVSKRYKLYH QQLQMVVSSF ESVAGLSGAT  540
PYVSLAFKAI SKNFRCLKSA IMNQLKHVAK ALGEEMRSSA TVTSSSRGHI TNTSAKLNCL  600
DQILQKHKSG GANVGFLEPQ QHVWRPQRGL PERAVAILRA WLFEHFLHPY PTDTDKHMLA  660
TQTGLSRNQV SNWFINARVR VWKPMVEEIH MLETQGSVAT NQDFKTKTDG QSLSDGTAGS  720
SFNGDQPMND KLAISAMSDE HMDYSGIGSS RSNNEEGLNA EHWNQEKRSR VDSNHRLTTS  780
MDRSLMGFIP YQRNMIEVGG LSAVSLTLGL RHGVESSPQQ QQEDQLRRQY GGQMIHDFAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	5e-69	TALE family protein