PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY59400.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WOX

Protein Properties

Length: 296aa MW: 32561.8 Da PI: 6.0364

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY59400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.5	7.3e-21	105	165	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + + +ps+++++e++ +l +++e++V++WFqNrRa+ k+ GAY59400.1 105 RQRWTPTPVQLQILESIFDQgTGTPSKQKIKEITVELsqhgQISETNVYNWFQNRRARSKR 165 89***************99************************************97 PP
2	Wus_type_Homeobox	103.8	1.2e-33	104	167	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G+ tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq GAY59400.1 104 ARQRWTPTPVQLQILESIFDQGTGTPSKQKIKEITVELSQHGQISETNVYNWFQNRRARSKRKQ 167 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MEWDNIREAA QQETQTQNQN QNQRGGENDN NNVVNGVMYV KVMTDEQLET LRKQIAVYAT 60 ICEQLVEMHK SLSAHQDLAA AGGRLGNIYC DPLMTSGGGH KISARQRWTP TPVQLQILES 120 IFDQGTGTPS KQKIKEITVE LSQHGQISET NVYNWFQNRR ARSKRKQLVS SSANTLHNGG 180 GGGAGAGAGG ADSEVETEVD SLLLHDEHKT TKPENLSSAH STSQPQHLRN LPPTPRPRDD 240 DDPMCFHTPA DISSSQLHFL GVFSNNPRDD HLTGKMGGMP GSYNLYDHAE DYSMAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	167	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	2e-88	WOX family protein