PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY48417.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MYB | ||||||||
Protein Properties | Length: 367aa MW: 41193.7 Da PI: 6.3601 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 6e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + ++++g++R++k+c++rw++yl GAY48417.1 14 KGPWSPEEDAKLKEYIEKYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.4 | 5.8e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ GAY48417.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDAKLKEYIE KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR 120 RKQSNNINGL ISTSGQDVNG VNNGGDENNN SQYSQGLSNS AIERLQLHMQ LQSLQNPLSF 180 YNNPSFWPKL HPVQEKMIQN LQSLNQSCQN PNLQNVLPSS QLGLHEQNVG NFFEQSNSPP 240 SAPQDFPQST CPVPVSNTDN NVMNSNAMLK ANGFEPYNAA NQEVSTFQAE IENFLNNNKA 300 VGFTAQEENQ IAQFDCFNVL NGSNKESLIW WANEFDSKSA SSNSWDSTPA IHQSEGMFQD 360 YELGYNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 3e-96 | MYB family protein |