PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY44247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 243aa MW: 28096.2 Da PI: 8.8489 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.3e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g lKKA+E+SvLCdaevaviifs++gkl+eys+ GAY44247.1 9 KRIENKINRQVTFSKRRAGFLKKAHEISVLCDAEVAVIIFSHKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 101.6 | 1e-33 | 85 | 174 | 11 | 100 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + + ++ e ++Lk++i+ Lq++qRh+lGedLesLslk++qqLeqqL+++lk+iRs+Kn+l+ e+i+elqkkek+++e+n+ L k+++e GAY44247.1 85 PESQRNWPLECNNLKAKIDLLQKNQRHYLGEDLESLSLKDIQQLEQQLDTALKHIRSRKNQLMQESISELQKKEKSIEEQNNLLVKQIKE 174 556789*********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRAGFLK KAHEISVLCD AEVAVIIFSH KGKLFEYSTD 60 SCMEKILERY ERYAYAERQL IAPDPESQRN WPLECNNLKA KIDLLQKNQR HYLGEDLESL 120 SLKDIQQLEQ QLDTALKHIR SRKNQLMQES ISELQKKEKS IEEQNNLLVK QIKEREKAAA 180 QQAQWGNQIQ NQVPNTLSFL LPQPPPCLRL GGAYQEQASE MRRNELNLTL EPVCSCSLGC 240 FAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-118 | MIKC_MADS family protein |