PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY44158.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TCP

Protein Properties

Length: 274aa MW: 29286.8 Da PI: 10.1343

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY44158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.1	6.3e-38	28	113	2	86
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as a++s+s+++ns GAY44158.1 28 APKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLaAAGASVSEQGNSV 113 789******************************************************************77754455555444333 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MAENNKPGEI KDFQIMIANK DDSTKKLAPK RSSNKDRHKK VDGRGRRIRM PALCAARIFQ 60 LTRELGHKSD GETIQWLLQQ AEPSIIAATG TGTIPASMLA AAGASVSEQG NSVSAGLHTK 120 IEGLGPGVGS INRANWTMMS ANFGRSQIPS GVWPTINGTG SGFIQNSGQL TSNFGSENLS 180 ANPKFGFHGI EFPNMNMGLM SFSSMLSGAS HQIPGLELGL SQDAHVGVMN SQAISQFYQQ 240 MGHHRSASGS LNQQHQHQQQ ISDKDDSQGS GSKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-66	TCP family protein