PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY36576.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family AP2
Protein Properties Length: 389aa    MW: 43413.5 Da    PI: 8.6826
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY36576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.71.2e-1271127155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++gr++A+++d  s+n  +r k  + g ++ +e Aa+a++ a++k++g
  GAY36576.1  71 SKYRGVSRHRWTGRYEAHLWDkGSWNPtQRkKGKQ-GAYDEEESAARAYDLAALKYWG 127
                 89*******************88887786625555.********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MENGALKSGG RGGDMEAVLV PACIINKRRR RERDPSLGIG FNNVNQQVEQ QADQAAAATT  60
AAAATTVKRS SKYRGVSRHR WTGRYEAHLW DKGSWNPTQR KKGKQGAYDE EESAARAYDL  120
AALKYWGTST FTNFPVSEYE KEIEIMKTVT REEYLATLRR RSSGFSRGVS KYRGVARQAA  180
HVTFLHNNFF MLIASTQEEA AHAYDIAAIE HRGINAVTNF DISTYIRWLK PAAGGNSHNP  240
AFQEPKPILE YSPPTSSLLS NHILTEGHQI TDISIFNDSN PFPLQDQDIP KKQDSFQANI  300
KSSLPFSPCT KSSSSSPTAL SLLLRSSVFK ELVEKNPNNS AEVNIEENDT KNGPKIGSKN  360
EVEETLYDEF VINNPVQYIC PSSKMYFMA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197105PTQRKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.34e-53AP2 family protein