PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY35418.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 242aa MW: 26908.9 Da PI: 6.9555 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 177 | 1.8e-55 | 61 | 157 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 vreqdrf+Pianv+rim+k+lP++akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl+vyl++yre+ege+ GAY35418.1 61 VREQDRFMPIANVIRIMRKILPQHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYREMEGER 157 69*********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
QAPGEMERTG GFRGYRQQLP NASRGPGLKF TETNIRLASA HEINQTNNNN HTNYEDNECT 60 VREQDRFMPI ANVIRIMRKI LPQHAKISDD AKETIQECVS EYISFITGEA NERCQREQRK 120 TITAEDVLWA MSKLGFDDYI EPLTVYLHRY REMEGERGSI RGEPPLVKRP PVEFRTLGVA 180 AFAAPAAAFH HMGLGRGHGF LGAATAPATG TYFNNNDPSN NNTAAGSSQP AVANGETYAH 240 NK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.1 | 1e-69 | NF-YB family protein |