PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GAY31903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 23061.2 Da PI: 7.7658 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.1 | 7e-21 | 53 | 102 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ r +r++lg+f taeeAa+a+++a+ +++g GAY31903.1 53 NYRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFNTAEEAARAYDKAAVEFRG 102 59*******.**********82....48***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
IPPMSYGNDE FISRQIITIY PHQQQQPQQQ QHQRQKKAAT GSSGAGKRRG KKNYRGVRQR 60 PWGKWAAEIR DPRRATRVWL GTFNTAEEAA RAYDKAAVEF RGPRAKLNFP FPDSTTVATA 120 YEQQQQGESS HSQQPQQVAS EESNQSVART NNNNGNSAAA TEAMGDQIQS DFWEMIGEDE 180 IQQWMTMMDF GTDSSDSANT ATGLTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 3e-24 | ERF family protein |