PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dr09298.1
Organism
Dioscorea rotundata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea
Family WRKY
Protein Properties Length: 301aa    MW: 33193.5 Da    PI: 7.7178
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dr09298.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.87e-31135193259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp++++itY+ eHnh+
  Dr09298.1 135 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSQTDPSTLIITYTAEHNHP 193
                799************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDFEDWDLQA VVKSCCCSEP VLTTATTTVM RDPFSSFPIS SVLKEYCPKE DEDLLTSFPD  60
LLATKTALHE LEELCKPFFL KPQRPPQKQL QQEKKRTPSS SSSLPVAPKQ PSRSKRRKSQ  120
VKKVVCHVPA GDNSSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCLARK QVERSQTDPS  180
TLIITYTAEH NHPVPTHRNS LAGTTRNKFP IPPSTATQRA STSTPTLSPT TPLKATVLEG  240
NEEDMISMVD EDVLFMDFEG LNTTVSDSTS GFFDGVDGLP DFFMTPSWMS SNNAAAAAGG  300
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-48WRKY family protein