PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dr05072.1

Organism

Dioscorea rotundata

Taxonomic ID

55577

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Dioscoreales; Dioscoreaceae; Dioscorea

Family

WRKY

Protein Properties

Length: 497aa MW: 53590.9 Da PI: 6.5106

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dr05072.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.4e-30	250	308	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ Dr05072.1 250 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRSVLITTYEGTHNHP 308 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MDQRPGTGGL SFLIPAGSSM DTNKRVHDEM DFFSTDHEKK MKVKDDPLLP IIKKEDLTIN 60 INTGLQLLTA NTGSDQSTLD DSLSSLNQDD KECENELEAM QAQLGKMNEE NQRLRGMLNQ 120 VTSNYNALQM HLNALLQQKN QRINGLVPSP FMNHVDANNA IKNDQETIVP RQFMDLGPTA 180 TEIDEHSHSS TGGSRERSST PPNDVDIGSI ETNNNNNNNN NNKEIAPKQE ATMRKARVSV 240 RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMATG CPVRKQVQRC AEDRSVLITT 300 YEGTHNHPLP PAAMAMASTT SAAASMLLSG SMSSSDGLMN SNFLARTMLP CSSSMATISA 360 TAPFPTVTLD LTHSANPLQL QRPTSSPTMQ LSAPQPVFQP QLYNQSKFTG LQMSPDFDGS 420 PLAKRSTTTL ADTVSAATAA ITSDPNFTAA LAAAITSIIG SGGGAAGGGN SHQMNNNANN 480 INKSLANGPY TSNFPDT

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MDQRPGTGGL SFLIPAGSSM DTNKRVHDEM DFFSTDHEKK MKVKDDPLLP IIKKEDLTIN  60
INTGLQLLTA NTGSDQSTLD DSLSSLNQDD KECENELEAM QAQLGKMNEE NQRLRGMLNQ  120
VTSNYNALQM HLNALLQQKN QRINGLVPSP FMNHVDANNA IKNDQETIVP RQFMDLGPTA  180
TEIDEHSHSS TGGSRERSST PPNDVDIGSI ETNNNNNNNN NNKEIAPKQE ATMRKARVSV  240
RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMATG CPVRKQVQRC AEDRSVLITT  300
YEGTHNHPLP PAAMAMASTT SAAASMLLSG SMSSSDGLMN SNFLARTMLP CSSSMATISA  360
TAPFPTVTLD LTHSANPLQL QRPTSSPTMQ LSAPQPVFQP QLYNQSKFTG LQMSPDFDGS  420
PLAKRSTTTL ADTVSAATAA ITSDPNFTAA LAAAITSIIG SGGGAAGGGN SHQMNNNANN  480
INKSLANGPY TSNFPDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-107	WRKY family protein

Link Out ? help Back to Top
Ensembl	Dr05072.1