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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc088125.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 268aa MW: 29595.1 Da PI: 5.4929 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.8e-19 | 60 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ +g+WvAeIr+p + r kr +lg+f +a eAa+a+++a+++++g Cse_sc088125.1_g010.1 60 CSFRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFASAVEAARAYDEAARAMYG 110 579****999.**********8...3.35***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MDNLAKKQKR KRTEGPKIVA ETIAKWVKIN KDAETTRKAP AKGSTKGCMK GKGGPENSRC 60 SFRGVRQRTW GKWVAEIREP NRGKRLWLGT FASAVEAARA YDEAARAMYG LSARINLPNY 120 CPNASLLCKT ASSCDSTITC GQSENGEVRE SKTGLDTQNV CQASASEVDV TGICNDDGYY 180 QGFPEDEMID IDELLGLMDD QKGESINEAG SSGHPMYDAW FENNLDDLGF DFMETVKGFN 240 GYLNNSMSGF ELETSGLHTL RMRIDVHN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 2e-35 | ERF family protein |