PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc088125.1_g010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 268aa    MW: 29595.1 Da    PI: 5.4929
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc088125.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-1960110155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + ++GVr++  +g+WvAeIr+p   + r kr +lg+f +a eAa+a+++a+++++g
  Cse_sc088125.1_g010.1  60 CSFRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFASAVEAARAYDEAARAMYG 110
                            579****999.**********8...3.35***********************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDNLAKKQKR KRTEGPKIVA ETIAKWVKIN KDAETTRKAP AKGSTKGCMK GKGGPENSRC  60
SFRGVRQRTW GKWVAEIREP NRGKRLWLGT FASAVEAARA YDEAARAMYG LSARINLPNY  120
CPNASLLCKT ASSCDSTITC GQSENGEVRE SKTGLDTQNV CQASASEVDV TGICNDDGYY  180
QGFPEDEMID IDELLGLMDD QKGESINEAG SSGHPMYDAW FENNLDDLGF DFMETVKGFN  240
GYLNNSMSGF ELETSGLHTL RMRIDVHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-35ERF family protein