PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc046628.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Dof

Protein Properties

Length: 229aa MW: 25064 Da PI: 9.0462

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc046628.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.5	2.6e-37	41	100	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++++cprC+s ntkfCyynny++sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k++ Cse_sc046628.1_g010.1 41 TEQRPCPRCHSPNTKFCYYNNYNTSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRQ 100 68899***************************************************8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MQSPPHSPTT TTTTTTTTNN HQETSTFTTT TKRHLPPHTE TEQRPCPRCH SPNTKFCYYN 60 NYNTSQPRHF CKSCRRYWTH GGTLRDIPVG GGTRKNAKRQ KLIKPTSGYV TTSSPVEYRS 120 LGPPPPVAAA GNVMVPFDGN GFMSFFGLGG FEHGVWPFSG GCCDGGHGGV HGGRGEWQVE 180 SGGERFVMPE FAISTPSYGA VKTEDHFVMP GLAISTPSYV MKTEDKLTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	4e-35	Dof family protein