PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc043073.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 306aa    MW: 33384.3 Da    PI: 4.3188
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc043073.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.3e-2060110155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            + ++GVr++  +g+WvAeIr+p   + r kr +lg+fg+a eAa a+++a+++++g
  Cse_sc043073.1_g030.1  60 CSFRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFGSAVEAALAYDEAARAMYG 110
                            579****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MDNLTKKQKR KRSEGPKIVA ETLAKWMKIN KDAKTKRKAP AKGSTKGCMK GKGGPENSGC  60
SFRGVRQRTW GKWVAEIREP NRGKRLWLGT FGSAVEAALA YDEAARAMYG PSARINLPNY  120
CPDASLLCKT ASSCGSTITC GQSESSKVRV SKTGLDTQNV CQASASEVDV TGIGNDDGYY  180
QGFPEDEMID IDELLGLMDD QKDESINEAE SSGHPMYDAW FENKLDDFGF DFMETGPEEC  240
NFTLEEFGLS LDPAEPVTTG PEECGFTLEE FGLSLDPAEP VITGPEECGF TLEEFGLSLD  300
PAEPVM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1938KRKRSEGPKIVAETLAKWMKINKDAKTKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.14e-37ERF family protein