PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033248.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 379aa MW: 41693.6 Da PI: 5.3374

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033248.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.9	2.7e-34	172	226	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav++LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ Cse_sc033248.1_g010.1 172 KPRMRWTPELHEAFVEAVNRLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 226 79****************************************************8 PP
2	Myb_DNA-binding	55.8	1.1e-17	174	225	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ Cse_sc033248.1_g010.1 174 RMRWTPELHEAFVEAVNRLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 225 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MSSTNGSVGH IVSSSPAMSS HLHMSSISSD DTCSKKAPFI AQSSGVLRST AFRDYMKENN 60 STWCADSLSD FLDYPESSPI ESNDLQIIPA EDIGKPNDWQ DWADQLITED DGVTPNWNEI 120 LVDDPQPKME FHVGKSSKKT LSVQVKGLVP ASSGDASTPM TPSSCGSGSQ SKPRMRWTPE 180 LHEAFVEAVN RLGGSERATP KGVLKLMKVE GLTIYHVKSH LQKYRTARYK PEPSSEGPAE 240 KKPAPVQDLS PLDFKTSSEI TEALRLQVEV QKRLHEQLEI QKNLQLRIEE QGKYLQMIFE 300 KQCKFGIDQL RPSSPTLEKS EAEVTHEISG SPPQTKTEPG PLKLGPPIAE ASSKEVEVDT 360 SESQPSKRAK LNESSTESS

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MSSTNGSVGH IVSSSPAMSS HLHMSSISSD DTCSKKAPFI AQSSGVLRST AFRDYMKENN  60
STWCADSLSD FLDYPESSPI ESNDLQIIPA EDIGKPNDWQ DWADQLITED DGVTPNWNEI  120
LVDDPQPKME FHVGKSSKKT LSVQVKGLVP ASSGDASTPM TPSSCGSGSQ SKPRMRWTPE  180
LHEAFVEAVN RLGGSERATP KGVLKLMKVE GLTIYHVKSH LQKYRTARYK PEPSSEGPAE  240
KKPAPVQDLS PLDFKTSSEI TEALRLQVEV QKRLHEQLEI QKNLQLRIEE QGKYLQMIFE  300
KQCKFGIDQL RPSSPTLEKS EAEVTHEISG SPPQTKTEPG PLKLGPPIAE ASSKEVEVDT  360
SESQPSKRAK LNESSTESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	4e-92	G2-like family protein