PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc029334.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | C2H2 | ||||||||
Protein Properties | Length: 377aa MW: 42398.6 Da PI: 6.7058 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16 | 3.3e-05 | 215 | 234 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Cse_sc029334.1_g020.1 215 FSCPVCFKTFNRYNNMQMHM 234 89*****************9 PP | |||||||
2 | zf-C2H2 | 14.4 | 0.00011 | 299 | 321 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Cse_sc029334.1_g020.1 299 FMCRKCGKAFAVRGDWRTHEKNC 321 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MSDPYYSNLY SKWFKLDQYS NNSNTNLPHQ VHHHQNPQSY YYNTFQSSYP NIRTVSTFGF 60 SPSTCVTTPY PTPPPSPPLR EALPLLSLSP SRKQEDKQQP QQRSCNSTTR HDIEEDDGDD 120 DEDDEDNDDD NETGVTVALH IGLPNASAAD LASLISNSSN SSSNTSEIIV ANSNKGSKEG 180 DGDEASLGYS SVSRLNKGQY WIPTPSQILI GPTQFSCPVC FKTFNRYNNM QMHMWGHGSQ 240 YRKGPESLRG TQPTGMLKLP CYCCAPGCRN NIDHPRSKPL KDFRTLQTHY KRKHGIKPFM 300 CRKCGKAFAV RGDWRTHEKN CGKLWYCTCG SDFKHKRSLK DHIKAFGHGH AAYGVNGFEE 360 DDELASEIEQ DDDDGNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-133 | C2H2 family protein |