PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc027610.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 235aa MW: 26833.6 Da PI: 9.4234 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 51.7 | 1.9e-16 | 107 | 158 | 2 | 54 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 + ++Wt eLH++ ++ +qL G+ + P +il+lmkv+gLt+ +v+SHLQ+ R Cse_sc027610.1_g020.1 107 NHIEWTIELHTKSISTTRQL-GERRCYPIEILKLMKVPGLTRMQVASHLQRCR 158 6799****************.9****************************988 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 235 aa Download sequence |
MSNLIYIQLM SEEDDDDFLA FLVLKKPLTV DVIMLIHQHV IREKRLSMKN VNKTMSHKFA 60 TRVQTNLQES GSCGSKRKER GSPRKDDITS YQSSEDNDVY DIIMKKNHIE WTIELHTKSI 120 STTRQLGERR CYPIEILKLM KVPGLTRMQV ASHLQRCRGG RWEVKEKRHV SSKITDLTLS 180 LNGCHTEANL MTNQAARGSP MMNGSSPQNI AGQGSVHDTN SSNHREAYNG FIDFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-14 | ARR-B family protein |