PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc027493.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 296aa    MW: 32866.8 Da    PI: 7.1886
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc027493.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.3e-21125175256
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                             y+GVr+++ +g+WvAeIr p++   r+r +lg+f+t+eeAa a+++a+ kl+ e
  Cse_sc027493.1_g010.1 125 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTPEEAALAYDNAAYKLRSE 175
                            59******9.**********965...5*************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MDVWNNVGFQ QFPTAGGELM EALLPFIKSA STVNYPDTLA FSSPSNSYSC PSSSFSPSLN  60
QQLHGSHIDL FTYEQPDLSF GLNQLTPSQI HYMQAQIQYS RCPAHLGPKP IPMKQSGSPS  120
KPAKLYRGVR QRHWGKWVAE IRLPKNRTRL WLGTFDTPEE AALAYDNAAY KLRSENARLN  180
FPHLRHNWLF NGAACKYSPL HSSVTAKLDE ICQSLADGKS IDGRKKPCKS TIKSKTAAEE  240
GKVEGSESDG CSGSSNSSQS SGLMFPELAV EESVWYDSEN FSLEKCPPYE IDWGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.15e-65ERF family protein