PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc025522.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 323aa    MW: 35966.5 Da    PI: 9.1676
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc025522.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.51.2e-53151421128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+
  Cse_sc025522.1_g030.1  15 LPPGFRFHPTDEELVVHYLKKKAASIPLPA-SIIAEIDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGT 101
                            79****************************.89***************988899********************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+vl++ ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl
  Cse_sc025522.1_g030.1 102 DKPVLTSgGTQKVGVKKALVFYGGKPPKGSKTNWIMHEYRL 142
                            *****9977788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MESTDSSSGC KQPHLPPGFR FHPTDEELVV HYLKKKAASI PLPASIIAEI DLYKFDPWEL  60
PAKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPVLTSGG TQKVGVKKAL  120
VFYGGKPPKG SKTNWIMHEY RLTDNKNISK PPGCDPTNKT ASLRLDDWVL CRIYKKNNMQ  180
RPVDSDGSDH TMTGMLASIP PSISLGLTRP TSGFNAMLEN HDHSVVYDTM MNSNDNNLSI  240
NLATSNLLPV KRSVSGLFWN DEGHTSNSPY TKRFFSESRT SEENSGSIAS LLTQLPQTTQ  300
MQHQQAMLGS MGSYQLSGMN WYA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.12e-99NAC family protein