PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc023773.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 451aa MW: 50560.3 Da PI: 10.6733

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc023773.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	25.2	3.2e-08	73	115	4	46
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 +++++ + ++ +p +AA + gv+ T+LK R++G++ WP Cse_sc023773.1_g010.1 73 SVNMKAVGQHAGKPTGQAAESFGVSRTTLKCFGREHGMPSWPL 115 678899999*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MDMMNSLNHS VDSSFGSRSD SSQSSVNNEA IVARDDVNTT INRNASMQIT NDGGEKNNRL 60 ERGRSRKILK IHSVNMKAVG QHAGKPTGQA AESFGVSRTT LKCFGREHGM PSWPLPKHGE 120 RTVVVTDSKL SQKPQSKQNL QQSSNGRVDL FGAVLLLVRI KRWSCSNKRH GCSGKWWSCG 180 KHGHLPFKLD SMDQVVRLML SLKRWRKRYL IKHAMQKNDY LVMSPKQIVA SVVSDKLDGT 240 SNKPIRKRKR TVLSFGLIME KAVANFGVGV SKLTGMSSNL GMQWWSYRKR LKSIQADVVT 300 STSEEVPTSV FAATSEPFPT TNVTHDCPTF VLHQQQTNLP DGLAQFKTTK REQFIENATA 360 SAVKKLTIKA TYKENMVKFP FTLLDGLEKL NEMVATRFQL RLGSFKLKYV DEDDDMILIA 420 CDTDLMLLVG DPRKPIHQPV IRLLVSPIAR A

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MDMMNSLNHS VDSSFGSRSD SSQSSVNNEA IVARDDVNTT INRNASMQIT NDGGEKNNRL  60
ERGRSRKILK IHSVNMKAVG QHAGKPTGQA AESFGVSRTT LKCFGREHGM PSWPLPKHGE  120
RTVVVTDSKL SQKPQSKQNL QQSSNGRVDL FGAVLLLVRI KRWSCSNKRH GCSGKWWSCG  180
KHGHLPFKLD SMDQVVRLML SLKRWRKRYL IKHAMQKNDY LVMSPKQIVA SVVSDKLDGT  240
SNKPIRKRKR TVLSFGLIME KAVANFGVGV SKLTGMSSNL GMQWWSYRKR LKSIQADVVT  300
STSEEVPTSV FAATSEPFPT TNVTHDCPTF VLHQQQTNLP DGLAQFKTTK REQFIENATA  360
SAVKKLTIKA TYKENMVKFP FTLLDGLEKL NEMVATRFQL RLGSFKLKYV DEDDDMILIA  420
CDTDLMLLVG DPRKPIHQPV IRLLVSPIAR A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	7e-14	Nin-like family protein