PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc020536.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 384aa    MW: 42498.5 Da    PI: 10.8668
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc020536.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK30.95.3e-10189230546
                 RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                            i+le++ k+F  p+++AA  L     +LKr  R +G++RWP+
  Cse_sc020536.1_g030.1 189 ITLEEIIKHFGEPMEEAAGILRAIRATLKRLSRSFGVSRWPY 230
                            99***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MSTEEPTTTA HSKDKKSFAL RKHPPYLEER NGSNQYAIGK FIQDKHKDLP VNFKKMLLNQ  60
LKKFVASAKL VQVKAFYMLP STAKTVVAAN LKKEAAPTKK KPAATANTKA VPARAKPTPK  120
ANPAAKAKPA PKAQPAAKAK PVPKTKPAAK AEPAPKVKLP AKVARTSTKW MPEKKAPAKV  180
APKTSGRLIT LEEIIKHFGE PMEEAAGILR AIRATLKRLS RSFGVSRWPY ETDKSDSLNS  240
IFKGSNEPHF TTNITHSPAT FSKHGKHSST SIRHQQVQTN LPDELAQPEI TNRNSMTLLT  300
IKATYKEDMV RFSFKLSDGF IKLEEEIATR FQLKLGNFSL KYKDIDGDMI LIACDRSLSV  360
SVGDFRLPEG RQTVIRLVVC LLAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.12e-13Nin-like family protein