PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016603.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 331aa    MW: 35508 Da    PI: 5.1433
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016603.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.47e-08644242
                           SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS
        Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42
                           g+W+ eEd+ l++++ ++ ++ W+ I + ++ g+++k c  
  Cse_sc016603.1_g020.1  6 GPWSLEEDDMLLNLFGKHAPN-WSPINESIP-GKSAKTCEF 44
                           89****************977.*********.*****9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MDQIEGPWSL EEDDMLLNLF GKHAPNWSPI NESIPGKSAK TCEFMWETVK QKLRTTISDT  60
PFMTGTQMKT SLQSTLSDQA RAQLKHMFRL FSSRTRDMAR DNVSRPSGGT HSYSPDRSAP  120
SGQAPYRHTN IYIPPPSFSD IDSTVMNFGH EVGGVSGNAP SISGVVRSNV SQPLGGMHSY  180
SGEQSAPSIS GMGRGTVSQP LGGMHPYNGE QSAPSISGMA RGNVSQPLGG IHPYSAEHST  240
PSICGMARGN VSQPLGGMHP YSGEQSAPSI SGMVKGNVSQ PLGGMHPFSG EESEPSRVAF  300
NKQDSSPTMS ESDDDFSDDS FYDDEFSESD N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.18e-13MYB family protein