PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011300.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 509aa MW: 58536.1 Da PI: 10.3277

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011300.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.6	2.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl Cse_sc011300.1_g020.1 14 KGLWSPEEDEKLIKHITKFGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MARHSTCYKQ RLRKGLWSPE EDEKLIKHIT KFGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEETLIVE LHAVLGNKNR FTTSHENANL ATHTDTKHTN TDQFSGFLDF 120 AYNQPPQPES SLLFGSSSNT DTTLSNPILS GFQPSNWDTT ASLYDANNGF HNQVPLVGNE 180 TQPEDIKWNK YLQSPFLFGG TTTLQSRPPQ LPQMESQPSG SQFKVPKARE PAKGRGKKTK 240 AKKHVVDLDA DDDEDVEVIA QADRRKWTKS EEMLLVQCWI EISQDRDMGN DRPEEFFWNV 300 ILDIFNSKTT DNQRGKNMIT GKWSRINGDC QKFNAVYKHL QRRSGENEQD HVKNAKVNFT 360 QRFGGKEFAY EKCWGVLKNY PKWDAEDPID ITCLEDIFRP DRRPRPERDG CKRAAKKQKS 420 TSTSSAASSG GSQSSSFSLV LKKMEANEPQ RNRSRLQRRA LQAPVEVNRV VFRDIYPKYM 480 LKKPTLKGLV TRRGGRRKKL SKRRSRWIF

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MARHSTCYKQ RLRKGLWSPE EDEKLIKHIT KFGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEETLIVE LHAVLGNKNR FTTSHENANL ATHTDTKHTN TDQFSGFLDF  120
AYNQPPQPES SLLFGSSSNT DTTLSNPILS GFQPSNWDTT ASLYDANNGF HNQVPLVGNE  180
TQPEDIKWNK YLQSPFLFGG TTTLQSRPPQ LPQMESQPSG SQFKVPKARE PAKGRGKKTK  240
AKKHVVDLDA DDDEDVEVIA QADRRKWTKS EEMLLVQCWI EISQDRDMGN DRPEEFFWNV  300
ILDIFNSKTT DNQRGKNMIT GKWSRINGDC QKFNAVYKHL QRRSGENEQD HVKNAKVNFT  360
QRFGGKEFAY EKCWGVLKNY PKWDAEDPID ITCLEDIFRP DRRPRPERDG CKRAAKKQKS  420
TSTSSAASSG GSQSSSFSLV LKKMEANEPQ RNRSRLQRRA LQAPVEVNRV VFRDIYPKYM  480
LKKPTLKGLV TRRGGRRKKL SKRRSRWIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	7e-51	MYB family protein