PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009626.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 482aa MW: 53470 Da PI: 4.9184

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009626.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	44.1	6.4e-14	372	472	1	90
NAM 1 lppGfrFhPtdeelvveyLkkk.vegkk....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.. 79 lp+G++F+P d e++ + L+k+ v+g + ++ + +ke+ +i++++P++L v ++ + +fF+k+ k ++tg++k+r+++ Cse_sc009626.1_g010.1 372 LPRGLKFDPLDPEIIEHLLAKSgVNGFPphpfIDDFIPtVKEAdGICYTHPQKLA-GVLQDGSVSHFFHKAFKMQSTGTKKRRKIHgd 458 699**********777776644554476553332333777756*****8.555667889**************87766 PP NAM 80 ..sgy.Wkatgkdk 90 g+ W++tg++k Cse_sc009626.1_g010.1 459 dlGGFrWNQTGRTK 472 766666***987 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MQVEDNQIVD DVALSLVVFG AHGPNSPYLV YQTDWTNDFK CFFKWLSAVE FSSDVYHETV 60 AIARGLTQVQ LAYDHPPVLV EGLEKHCILV ASSNPEDQLL TAETVAESFL HVKGVSASYL 120 KAKRNKSAID QSICLEKIES GYTFLISDDL IEACPYLSSY SDLLANNPTN QKSLTDISPE 180 RVQSLAPLDD PFCLFPVLDG PPPLLDNQHF SDLISDKSFD HGSERVLSFA PFDDPLCLSP 240 LLDARPPSLD DEHLYLVSDV PFDYDFETSD IVPSAVRCDE SEQAQSSTVP QSARGDLVNP 300 WDINLSTRHP CLAATHRPSW LIDSSMIATM IRSASGSCNP EHINWKSNPT KACPNCHHIV 360 GNSDSNQAWP GLPRGLKFDP LDPEIIEHLL AKSGVNGFPP HPFIDDFIPT VKEADGICYT 420 HPQKLAGVLQ DGSVSHFFHK AFKMQSTGTK KRRKIHGDDL GGFRWNQTGR TKCRFTWGST 480 WG

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MQVEDNQIVD DVALSLVVFG AHGPNSPYLV YQTDWTNDFK CFFKWLSAVE FSSDVYHETV  60
AIARGLTQVQ LAYDHPPVLV EGLEKHCILV ASSNPEDQLL TAETVAESFL HVKGVSASYL  120
KAKRNKSAID QSICLEKIES GYTFLISDDL IEACPYLSSY SDLLANNPTN QKSLTDISPE  180
RVQSLAPLDD PFCLFPVLDG PPPLLDNQHF SDLISDKSFD HGSERVLSFA PFDDPLCLSP  240
LLDARPPSLD DEHLYLVSDV PFDYDFETSD IVPSAVRCDE SEQAQSSTVP QSARGDLVNP  300
WDINLSTRHP CLAATHRPSW LIDSSMIATM IRSASGSCNP EHINWKSNPT KACPNCHHIV  360
GNSDSNQAWP GLPRGLKFDP LDPEIIEHLL AKSGVNGFPP HPFIDDFIPT VKEADGICYT  420
HPQKLAGVLQ DGSVSHFFHK AFKMQSTGTK KRRKIHGDDL GGFRWNQTGR TKCRFTWGST  480
WG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	450	454	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	3e-61	NAC family protein