PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc007537.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 177aa MW: 20154.1 Da PI: 9.7686 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.8 | 3.7e-52 | 42 | 165 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhP+deelv++yL +k++ ++ +l + evd++k+ePwdLp+++ + kewyf+s+rd+kyatg r+nrat sgyWkatgk Cse_sc007537.1_g030.1 42 LPPGFRFHPRDEELVCDYLFNKLSLSDSHL---LVEVDLNKCEPWDLPETACVGGKEWYFYSQRDRKYATGLRTNRATVSGYWKATGK 126 79**********************999666...99*************7777799********************************* PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 d+++++ +++lvg++ktLvfy grapkg+ktdWvmhe+rl Cse_sc007537.1_g030.1 127 DRSIFR-NRTLVGMRKTLVFYLGRAPKGKKTDWVMHEFRL 165 ******.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
VCNLALSPPI SNYTTTHKVK LSTHTSSHRS VMSNLSLVEA TLPPGFRFHP RDEELVCDYL 60 FNKLSLSDSH LLVEVDLNKC EPWDLPETAC VGGKEWYFYS QRDRKYATGL RTNRATVSGY 120 WKATGKDRSI FRNRTLVGMR KTLVFYLGRA PKGKKTDWVM HEFRLQGSLA PPVDSSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 5e-80 | NAC family protein |