PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc007098.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 527aa    MW: 58661.6 Da    PI: 5.758
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc007098.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS302.88.3e-931685262374
                   GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                            v+ L+++Ae++++++ +laq +Larl+++  +p+g+p+qR+a+yf+eAL++ l++       + +++++++++ +++++a+k+fs+vs
  Cse_sc007098.1_g020.1 168 VDDLIRIAECFETRSIQLAQVILARLNQRlHAPNGKPLQRAAFYFKEALQSLLTG------PTRTTQSSTSSEIIQAIKAYKTFSNVS 249
                            678*************************99*************************......4445555555679************** PP

                   GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeel 172
                            Pi+ fs +taNqa+leav+g+  vH+iDfdi+ G++ +++++++a+++      +p +RiT+v+++e   + e + ++++L +fA+ l
  Cse_sc007098.1_g020.1 250 PIPMFSDFTANQAMLEAVDGAMIVHVIDFDIGLGGHLASFMKEIAEKAearkIHSPAVRITAVVPEE--YEMESKLIRDNLWQFARGL 335
                            *********************************************9984433459**********66..99999************** PP

                   GRAS 173 gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerfl 258
                            +++f+++++  +++e l+++++++ +gE++aV l+  +++            +++++ ++++ P+++v+v++e  +  + + F + ++
  Cse_sc007098.1_g020.1 336 KLRFDIEFVSFRTFEYLSFKSIKFMEGEKTAVLLSSTVFHKT---------GPAFINDLRRITPNIIVIVDSEGVMggEPSFFRQTVI 414
                            ********9999********************9998766654.........478*******************7774234468899** PP

                   GRAS 259 ealeyysalfdsl.eaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrk 343
                            + le+ys++++sl +a+++  s  ++++k+E +++ ++i+ +v ++g++       +  Wre + +aG ++v +s++a  qa++llr+
  Cse_sc007098.1_g020.1 415 DGLEFYSTVLESLeAANVGGGSgsDWMRKIEMFVMLPKITAAVEASGRQ-------VPPWREVFARAGIRAVGMSQFADFQAECLLRR 495
                            *************888898777779**********************98.......99****************************** PP

                   GRAS 344 vksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                            v+++g++v ++++++vl+W+drpLv++SaWr
  Cse_sc007098.1_g020.1 496 VQVRGFHVVKRQAEMVLCWHDRPLVATSAWR 526
                            ******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    
MKLPFVSSQN NNIKQQVSSA GAVAGTGGVA GGGGIISNRY EPKSVLDVRR SPPRSIAGKA  60
SEFNTTDHNS VVFTSSDDQL PLDHGMVHQF EEWDSLMRDL GLHDDSTKPG YPLDLPELPP  120
IHTESAPAPT TTMFFHSDYE NLNPNLNSLD FISHDDSNND NDTDNDFVDD LIRIAECFET  180
RSIQLAQVIL ARLNQRLHAP NGKPLQRAAF YFKEALQSLL TGPTRTTQSS TSSEIIQAIK  240
AYKTFSNVSP IPMFSDFTAN QAMLEAVDGA MIVHVIDFDI GLGGHLASFM KEIAEKAEAR  300
KIHSPAVRIT AVVPEEYEME SKLIRDNLWQ FARGLKLRFD IEFVSFRTFE YLSFKSIKFM  360
EGEKTAVLLS STVFHKTGPA FINDLRRITP NIIVIVDSEG VMGGEPSFFR QTVIDGLEFY  420
STVLESLEAA NVGGGSGSDW MRKIEMFVML PKITAAVEAS GRQVPPWREV FARAGIRAVG  480
MSQFADFQAE CLLRRVQVRG FHVVKRQAEM VLCWHDRPLV ATSAWRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-127GRAS family protein