PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc005612.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | Dof | ||||||||
Protein Properties | Length: 116aa MW: 13705.9 Da PI: 10.8002 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 117.7 | 4.4e-37 | 33 | 92 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++cprC+s++tkfCyynny +sqPr+fCk+Crr+Wt+GG lrn+P+Ggg+rkn k++ Cse_sc005612.1_g050.1 33 PQQRPCPRCQSEDTKFCYYNNYITSQPRHFCKSCRRHWTHGGVLRNIPIGGGTRKNTKRQ 92 57899***************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MQSPPHSLNT SIITNNNHQE TSTLITTTKK QLPQQRPCPR CQSEDTKFCY YNNYITSQPR 60 HFCKSCRRHW THGGVLRNIP IGGGTRKNTK RQKLINPPLR VMLPLLLRYW WMLQEM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 2e-25 | Dof family protein |