PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc004625.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 231aa MW: 26669.5 Da PI: 9.6929 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 92.5 | 7.1e-29 | 73 | 155 | 45 | 128 |
NAM 45 wdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 wd+ k +e+ewyfF++r+kk+ +g r+nr+tk+g+Wk tg+d++++s ++++ glkktLvfyk rap g+ktdWvm eyrl Cse_sc004625.1_g010.1 73 WDMS---KIGEREWYFFVPRNKKHGNGGRPNRTTKNGFWKPTGSDRKIFSLsdTSKHLGLKKTLVFYKDRAPGGHKTDWVMSEYRL 155 5554...45889************************************998768888***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MGTLERLCGI SAQGSESWLV LTPVSAPLGQ ESCRSYSLWD GQWLWMDITT FEINAHLEIE 60 CRTNAGADGS TWWDMSKIGE REWYFFVPRN KKHGNGGRPN RTTKNGFWKP TGSDRKIFSL 120 SDTSKHLGLK KTLVFYKDRA PGGHKTDWVM SEYRLPDSCP LPKRLLAMAN SLVQAWKQRW 180 YIHSSDRLRN MFAARLDTDS DRLRNMFAAR LDADSLNRIF ITCQVFPIII W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G17040.1 | 7e-46 | NAC family protein |