PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002606.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 1085aa MW: 121175 Da PI: 9.8371

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002606.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.6	1.9e-10	49	83	3	39
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +WT eE e++++a +++G++ Wk++a+++ +R ++ Cse_sc002606.1_g040.1 49 PWTDEEVERFYKAYRKYGKE-WKKVAAMVR-TRNSEM 83 8*****************.******9.998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1085 aa Download sequence
MAPTRKSRSV NRRYSDYVDV SPSKILPPPL TSKSTGRQKR KLSDMLGSPW TDEEVERFYK 60 AYRKYGKEWK KVAAMVRTRN SEMVEALYTM NRAYLSLPEG TASVVGFIAM VSDHYNALEG 120 SDNDQEIKEL PKTIHKAKKR SQGLLQKNVG EDHLQSRPVR SSDRRLPQLK IRESDGCTVR 180 KRTPRFPINH SSRRDNGGSY VSPSKTSQKR EVDDVAHGAA MALTEALQRG GSPQVSQSPH 240 RMKTTPSKSR QKNTDSVRTK LHGNLIDEDG FEGSSGSLGA DNGGAEEVYQ KGRKYYGHKD 300 DNEFDDGGEA CSGTGEGLAV GSVSGNFDVE VANENIEQSS SQGKRKRNNK LFFRDETPGL 360 AALQQLADLS LLIEDSTELR DDKPPTGQRR HKNKVSADKE KVPNEFPFRS GKSKPGRESK 420 VDYKALSEGK LLDQSFNKSW KRKNKSSSYE ALFKEEEKVA NKAILSNDDN PPSKNCKSTR 480 LVEYSSSNSN TSRTGADSAV STAPLPTSDG VDLPLKRRNK RKANPSRIAS HGEMNLAKGN 540 LKDQPNSKLE PQEGAHYLKD KAFRHLSSST VRRWSTYEWF YSAIDYPWFA KREFVEYLNH 600 VGLGHIPRLT KVEWGVIRSS LGKPRRFSTN FLREEREKLY QYRDSVRKHY SELRSGDREG 660 LPTDLARPLG VGQRVIALHP ESREVHDGSV LTVDHDKCRI QFDRPELGVA FVKDVDCMPL 720 NLLDNMPEAL RRESGKPYRF SMNPAELRFP QQATGSLMLH TSNEHLEQSP TIALMNHRRG 780 HNGSGAPDKA AESAILQHAT YAPPSVSQIQ ARETDIRALS ELTLALDKKE AILTELKAVN 840 DGLISHKNET GTDMKVSESF KKEYALVTAA LLNLRQRNTH PSNPLPPWPK LQTSSSGIAG 900 PISSVDNFSL NNQLPSNVVE LVNNSRFEAH KLVHTAFQAM SKIKVEQNVR STVAAVLSSL 960 GVGKNPNEYG SSTIRPSEQF NGGAFKHKLN PTPAPLANNH ATDSKLQHDE TETTIPFELI 1020 VSCVATYHVI QMCTERQYPP SDVVQMLDSA FANLHPLCPQ NLPIFREIQM CMARVKTQIL 1080 ALVPS

Sequence ? help Back to Top

Protein Sequence Length: 1085 aa Download sequence

MAPTRKSRSV NRRYSDYVDV SPSKILPPPL TSKSTGRQKR KLSDMLGSPW TDEEVERFYK  60
AYRKYGKEWK KVAAMVRTRN SEMVEALYTM NRAYLSLPEG TASVVGFIAM VSDHYNALEG  120
SDNDQEIKEL PKTIHKAKKR SQGLLQKNVG EDHLQSRPVR SSDRRLPQLK IRESDGCTVR  180
KRTPRFPINH SSRRDNGGSY VSPSKTSQKR EVDDVAHGAA MALTEALQRG GSPQVSQSPH  240
RMKTTPSKSR QKNTDSVRTK LHGNLIDEDG FEGSSGSLGA DNGGAEEVYQ KGRKYYGHKD  300
DNEFDDGGEA CSGTGEGLAV GSVSGNFDVE VANENIEQSS SQGKRKRNNK LFFRDETPGL  360
AALQQLADLS LLIEDSTELR DDKPPTGQRR HKNKVSADKE KVPNEFPFRS GKSKPGRESK  420
VDYKALSEGK LLDQSFNKSW KRKNKSSSYE ALFKEEEKVA NKAILSNDDN PPSKNCKSTR  480
LVEYSSSNSN TSRTGADSAV STAPLPTSDG VDLPLKRRNK RKANPSRIAS HGEMNLAKGN  540
LKDQPNSKLE PQEGAHYLKD KAFRHLSSST VRRWSTYEWF YSAIDYPWFA KREFVEYLNH  600
VGLGHIPRLT KVEWGVIRSS LGKPRRFSTN FLREEREKLY QYRDSVRKHY SELRSGDREG  660
LPTDLARPLG VGQRVIALHP ESREVHDGSV LTVDHDKCRI QFDRPELGVA FVKDVDCMPL  720
NLLDNMPEAL RRESGKPYRF SMNPAELRFP QQATGSLMLH TSNEHLEQSP TIALMNHRRG  780
HNGSGAPDKA AESAILQHAT YAPPSVSQIQ ARETDIRALS ELTLALDKKE AILTELKAVN  840
DGLISHKNET GTDMKVSESF KKEYALVTAA LLNLRQRNTH PSNPLPPWPK LQTSSSGIAG  900
PISSVDNFSL NNQLPSNVVE LVNNSRFEAH KLVHTAFQAM SKIKVEQNVR STVAAVLSSL  960
GVGKNPNEYG SSTIRPSEQF NGGAFKHKLN PTPAPLANNH ATDSKLQHDE TETTIPFELI  1020
VSCVATYHVI QMCTERQYPP SDVVQMLDSA FANLHPLCPQ NLPIFREIQM CMARVKTQIL  1080
ALVPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	515	521	LKRRNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-157	MYB_related family protein