PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc002270.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 384aa MW: 42620.1 Da PI: 4.8002

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc002270.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	90.4	3.1e-28	56	198	1	128
NAM 1 lppGfrFhPtdeelvveyLkkk...vegkkleleev.ikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra... 77 lp+G++F+P+d el+ e+L++k +g++++ +v i+++d i++ +P++Lp +++ ++ +fF ++ ++y+tg+rk+r+ Cse_sc002270.1_g070.1 56 LPVGVKFDPSDVELL-EHLAEKfgvWNGNPNPYIDVfIPTLDvdegICYKHPENLP-GSRKDGNSFHFFYRTTNAYTTGHRKRRKiys 141 799**********.8999993433455555545556665544669*****.445677899**************8899 PP NAM 78 .....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 t++ +W++tgk+k++l+ +g ++g kk++v+y + +k+ k +Wvmh+++l Cse_sc002270.1_g070.1 142 essstTTDVRWHKTGKTKAILK-NGVHIGFKKIMVLYgtSVGGSKPCKINWVMHQFHL 198 999998899********9.999*******65345566679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MAKSWFLDGI TIARSIKASG LPSAYSQHKD SLPNWECPQC SFKIDNCNAH NEWPGLPVGV 60 KFDPSDVELL EHLAEKFGVW NGNPNPYIDV FIPTLDVDEG ICYKHPENLP GSRKDGNSFH 120 FFYRTTNAYT TGHRKRRKIY SESSSTTTDV RWHKTGKTKA ILKNGVHIGF KKIMVLYGTS 180 VGGSKPCKIN WVMHQFHLGT NEEEKDGEYV VAKIFFQAQK MLDNTGAGAE ESDSRSSLTS 240 PTTPMINVPH PPRSEIRTPA YEDNTSDDSV LQSLAQAQES ECFEQKYNPS SSTSEVIKDD 300 HDLKPPACED NSQDIDWDTL YNSLIDQGNL GSNVNTNNAV GNASTTSVGT TGLENLDLDS 360 LPDFTLADLY FSPEDSLSGW LDGF

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MAKSWFLDGI TIARSIKASG LPSAYSQHKD SLPNWECPQC SFKIDNCNAH NEWPGLPVGV  60
KFDPSDVELL EHLAEKFGVW NGNPNPYIDV FIPTLDVDEG ICYKHPENLP GSRKDGNSFH  120
FFYRTTNAYT TGHRKRRKIY SESSSTTTDV RWHKTGKTKA ILKNGVHIGF KKIMVLYGTS  180
VGGSKPCKIN WVMHQFHLGT NEEEKDGEYV VAKIFFQAQK MLDNTGAGAE ESDSRSSLTS  240
PTTPMINVPH PPRSEIRTPA YEDNTSDDSV LQSLAQAQES ECFEQKYNPS SSTSEVIKDD  300
HDLKPPACED NSQDIDWDTL YNSLIDQGNL GSNVNTNNAV GNASTTSVGT TGLENLDLDS  360
LPDFTLADLY FSPEDSLSGW LDGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	2e-74	NAC family protein