PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc001499.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 609aa MW: 67944.3 Da PI: 8.0942

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc001499.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	32.8	1.3e-10	501	544	3	46
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 +++++e ++k+ p+ +A k+Lgv+ ++LKr R + I+RWP Cse_sc001499.1_g010.1 501 DSLTMEAVEKQVGQPMDEAIKSLGVSRSTLKRFLRDHSIPRWPK 544 689****************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
LSFVCFHLLS RLTIFICVGK MNKEMILDVL NSRYCCLKEP SAALHQAYDR RHLTSLRVFG 60 TREDDEPQSP QSLSQHIIDT QILKKKITAA ISAICFRDRH VLVQFWSPVT VRKRCLLITL 120 DQPFGIGVVS EALYKYRLES EQRMFPVDGE HIEELGGSPS RVYRQKLPEW SLDIQGLPTS 180 QNILDSTACH NINGYISLPV VDPASGCCVG VIELVTLSKL VDYAFEVLEI SKALKVGALL 240 FAYSYVAKIY DILKVMCDTH NLPLAQTWEL SPLGSHVSHQ KSLQKSCSSF NRGCIGKVCV 300 STAGLPSYVR DLSMWEFHKA CMEQHLEKSR GVVGRALLSH CASYCENVTK LSEEEYPLVR 360 NACKSGLGGC FAIFLHGVEG KNDYILEFFM PLDITDSIDS YVLNLVPKLK LKIVDASGFE 420 MGDISSMEVV RPPSVVNNVS SMTEVDTPNE IIPHPFVTNI ATIACGAYAN IVSMQKTRDK 480 GNDAGEPSRN CLIRNIKRKR DSLTMEAVEK QVGQPMDEAI KSLGVSRSTL KRFLRDHSIP 540 RWPKSNLSNR SACVTDSNQN FPKKVFKRNE FFRGSLSGEN DVVSISPYGP NGSLEKPENL 600 SSRGVWSAK

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

LSFVCFHLLS RLTIFICVGK MNKEMILDVL NSRYCCLKEP SAALHQAYDR RHLTSLRVFG  60
TREDDEPQSP QSLSQHIIDT QILKKKITAA ISAICFRDRH VLVQFWSPVT VRKRCLLITL  120
DQPFGIGVVS EALYKYRLES EQRMFPVDGE HIEELGGSPS RVYRQKLPEW SLDIQGLPTS  180
QNILDSTACH NINGYISLPV VDPASGCCVG VIELVTLSKL VDYAFEVLEI SKALKVGALL  240
FAYSYVAKIY DILKVMCDTH NLPLAQTWEL SPLGSHVSHQ KSLQKSCSSF NRGCIGKVCV  300
STAGLPSYVR DLSMWEFHKA CMEQHLEKSR GVVGRALLSH CASYCENVTK LSEEEYPLVR  360
NACKSGLGGC FAIFLHGVEG KNDYILEFFM PLDITDSIDS YVLNLVPKLK LKIVDASGFE  420
MGDISSMEVV RPPSVVNNVS SMTEVDTPNE IIPHPFVTNI ATIACGAYAN IVSMQKTRDK  480
GNDAGEPSRN CLIRNIKRKR DSLTMEAVEK QVGQPMDEAI KSLGVSRSTL KRFLRDHSIP  540
RWPKSNLSNR SACVTDSNQN FPKKVFKRNE FFRGSLSGEN DVVSISPYGP NGSLEKPENL  600
SSRGVWSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	5e-76	Nin-like family protein