PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001457.1_g090.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 262aa    MW: 29918.3 Da    PI: 9.2665
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001457.1_g090.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.33.8e-46111373128
                    NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                            pGfrFhPt+eel+ +yLk+ v g+++++ e+i  ++iy ++Pw Lp + k +e+ewyfF++r+kk+ +g r+nr+tk+g+Wkatg+d+
  Cse_sc001457.1_g090.1  11 PGFRFHPTEEELLGFYLKNMVLGNNTRV-EIIGFLNIYLYDPWVLPDMSKIGEREWYFFVPRNKKHGNGGRPNRTTKNGFWKATGSDR 97 
                            9************************999.89***************8888899*********************************** PP

                    NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            +++s   ++++ glkktLvfykgrap g+ktdWvm eyrl
  Cse_sc001457.1_g090.1  98 KIFSLsdTSKHLGLKKTLVFYKGRAPGGHKTDWVMSEYRL 137
                            **998768888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MEDTRLELEL PGFRFHPTEE ELLGFYLKNM VLGNNTRVEI IGFLNIYLYD PWVLPDMSKI  60
GEREWYFFVP RNKKHGNGGR PNRTTKNGFW KATGSDRKIF SLSDTSKHLG LKKTLVFYKG  120
RAPGGHKTDW VMSEYRLPDS CPLPKDIVLC KIYRKATSIK VLEQRAAMEE AQHPPSPSSI  180
DSQHLDLSAP QPVTSSHVTS DSTNDTDKKP GLKLPMGAAK ISELRLPKCD MDWSHDSQLR  240
SPWLQNLIFT PPPYANMLNF LN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-102NAC family protein