PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000524.1_g060.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 327aa    MW: 36750.9 Da    PI: 10.281
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000524.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK31.14.7e-1094139348
                 RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 
                            +++++e ++k+  +p+++AA  L v++++L r CR ++++ WP  k
  Cse_sc000524.1_g060.1  94 DSLTMEAVKKHVGKPLNAAAAMLAVSPSTLRRFCRDNNMASWPLPK 139
                            689****************************************765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MTRILETVSS DSELIVADVA KTNSTHVVNQ LSPTFLNNNG GSIPSAEIVV HDHVIRDNDN  60
TTSNRDMVMQ ITTETIADAG EKSNRKRGRK RKIDSLTMEA VKKHVGKPLN AAAAMLAVSP  120
STLRRFCRDN NMASWPLPKH NKKTARTYSN LSQTSRSKQN LQQSSNVRFG LFGVVILLVR  180
VKRWCCASKR HGFSGNWWSC GKHSHLSFKS DSIYQVARLM LPNSNFFCAS REQFMSNVVS  240
DIRKVTVKDL DFKDDMINFQ IPITSSLFEL QNEVAHRAEL NSAGLRLKYK DEDGDLKLLA  300
CDADLQNLLG RYSTSNNTTI KLIMNKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.15e-14Nin-like family protein