PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000002.1_g180.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 401aa    MW: 45129.8 Da    PI: 4.2283
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000002.1_g180.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-19119168255
                    AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                            +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  Cse_sc000002.1_g180.1 119 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 168
                            89*******.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MDSYDMLRPI KYTQHKNVTT TMVNLSKNRH QKTSLLPKVV RISMTDPDAT DSSSDDEDEL  60
FGRRRVKKYV NEVNIRTSFN KPCPTTTQQV KVHVNGRGKK ISSRQKGPAA VVMVGGVRKF  120
RGVRQRPWGK WAAEIRDPAR RVRLWLGTYD TAEEAAMVYD NAAIKLRGPD ALTNFVTPPT  180
KAPDVNIPSS SGYDSGDESN NLPSPTSVLR FETESISKEG LEPVKEAEAE ECQSDNNNNG  240
SGQERQMVQD IDDSGYFGDF VSDHLEMDVP FLDNLFDFPI SDPVQFDDDD DDSPFLKYSP  300
IDEFDLPDPI RVEDQAPSSE YVNSLSSEYA TEDNFSSIPF DDTQIWCTDA NNNNALWDQD  360
FSMCNEMMLD VTSSSMLKVD DYFQDITGDF PPADVLMTGC F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-50ERF family protein