![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009780579.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
LFY |
Protein Properties |
Length: 416aa MW: 46126.9 Da PI: 6.854 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009780579.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Nsy&pid=XP_009780579.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 646.5 | 3.7e-197 | 1 | 395 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseap.........leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeel 86
mdpeafsaslfkwdpr a+ +pp+rlle a+++++p l+aa ++++r+l +leelf+ayG+ry+t+akiaelGftv+tL+dmkdeel
XP_009780579.1 1 MDPEAFSASLFKWDPRGAM-PPPTRLLEAAVAPPPPppalpppqpLSAAYSIKTRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMKDEEL 94
9**************9877.77778888887777666777665444555555556666************************************* PP
FLO_LFY 87 ddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqe.ekeaagsggeglgeaelvaaee.k 179
dd+m+sls+ifr++llvGeryGikaa+raerrrleeee ++r +lls+ ++aldalsqeglseepvq+ e+ea+gsgg+g +++e+vaa+
XP_009780579.1 95 DDMMNSLSQIFRWELLVGERYGIKAAIRAERRRLEEEE-LRRRGHLLSDGGTNALDALSQEGLSEEPVQQqEREAVGSGGGG-TTWEVVAAAGgG 187
************************************88.8888899999999****************99455677777766.899999887754 PP
FLO_LFY 180 kseeekkkaskkkqkrkkk.kelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiaker 273
+++++++k+ + ++k+ +++++e+++e +e+d + ++++ + +erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iaker
XP_009780579.1 188 RMKQRRRKKVVAAGREKRGgASAEEDEETEEGQEDDWNINDASGGISERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKER 282
44444444433333333330332333333333334444444555556************************************************ PP
FLO_LFY 274 GekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiW 368
GekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdid++fnahprL+iW
XP_009780579.1 283 GEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDTIFNAHPRLAIW 377
*********************************************************************************************** PP
FLO_LFY 369 YvPtkLrqLChlerskas 386
YvPtkLrqLCh ers+a+
XP_009780579.1 378 YVPTKLRQLCHSERSNAA 395
***************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MDPEAFSASL FKWDPRGAMP PPTRLLEAAV APPPPPPALP PPQPLSAAYS IKTRELGGLE 60 ELFQAYGIRY YTAAKIAELG FTVNTLLDMK DEELDDMMNS LSQIFRWELL VGERYGIKAA 120 IRAERRRLEE EELRRRGHLL SDGGTNALDA LSQEGLSEEP VQQQEREAVG SGGGGTTWEV 180 VAAAGGGRMK QRRRKKVVAA GREKRGGASA EEDEETEEGQ EDDWNINDAS GGISERQREH 240 PFIVTEPGEV ARGKKNGLDY LFHLYEQCRD FLIQVQNIAK ERGEKCPTKV TNQVFRYAKK 300 AGASYINKPK MRHYVHCYAL HCLDEEASNA LRRAFKERGE NVGAWRQACY KPLVAIAARQ 360 GWDIDTIFNA HPRLAIWYVP TKLRQLCHSE RSNAAAAAAS SSVSGGGGGG DHLPHF
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that act to specify determinacy in the progenitor cells for both flowers and leaves. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JQ686928 | 0.0 | JQ686928.1 Nicotiana tabacum cultivar SR1 LEAFY/FLORICAULA (LFY) mRNA, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-145 | floral meristem identity control protein LEAFY (LFY) |