PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Manes.12G022600.1.p
Organism
Manihot esculenta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
Family ERF
Protein Properties Length: 415aa    MW: 45296.7 Da    PI: 6.6776
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Manes.12G022600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-1861110255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a+++a+++++g
  Manes.12G022600.1.p  61 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDNAARAMRG 110
                          69*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003807.1E-3361124IPR001471AP2/ERF domain
PROSITE profilePS5103222.10261118IPR001471AP2/ERF domain
CDDcd000182.18E-3061117No hitNo description
Gene3DG3DSA:3.30.730.101.3E-2961117IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-2161118IPR016177DNA-binding domain
PfamPF008472.5E-1161110IPR001471AP2/ERF domain
PRINTSPR003672.5E-96273IPR001471AP2/ERF domain
PRINTSPR003672.5E-984100IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MEEALRRLNG MTHVQESIPL EQLITDNNKK STNGAPAAAS ATTTNKRSLK ESGGGSGGTL  60
RYRGVRRRPW GRYAAEIRDP QSKERRWLGT FDTAEEAACA YDNAARAMRG LKARTNFVYP  120
TTDPHSTTDP FLPPFSFSSK QSQASIMDLT SRHFNTNSSN WPSFGNPHVP DFSGSATQRS  180
SSASSNMLLR RDFLNPSSGS SFYNHPQALY DQFPYINGSS TSASSTFSSG SLVNPSNGSN  240
VSYNLTVSSS SSVPVNEDSR SYNFSGGPDR ANSQADYMEF FPQEPSDSGL LQEIIQGFFP  300
KPSDKINFSK SSINCTSEST VASAPQMPTC PMLDGFRREI KSEHLVKNEN LAIYLDHYHG  360
GPVQLENFNG VNSHVVPCGH GSQENLYMGA DSILDDIFQY PDLMSGFAAR VQNA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1949117171Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapManes.12G022600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021629237.10.0ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2C9USX40.0A0A2C9USX4_MANES; Uncharacterized protein
STRINGcassava4.1_029991m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-16DORNROSCHEN-like