PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00023493-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 412aa    MW: 45691.1 Da    PI: 7.5962
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00023493-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-1752101255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +gr++AeIrdp     +  r +lg+f+tae+Aa a++ a+++++g
  WALNUT_00023493-RA  52 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEDAACAYDLAARAMRG 101
                         59*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.1E-3252115IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-2952108IPR001471AP2/ERF domain
PfamPF008477.9E-1152101IPR001471AP2/ERF domain
PROSITE profilePS5103222.23452109IPR001471AP2/ERF domain
CDDcd000181.20E-2952108No hitNo description
SuperFamilySSF541715.56E-2152109IPR016177DNA-binding domain
PRINTSPR003674.5E-95364IPR001471AP2/ERF domain
PRINTSPR003674.5E-97591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MEDDFRRLNR LTHSLEPISD LHKKCTAMAT AATTTTTTNK RSLRDQPGGT MRYRGVRRRP  60
WGRYAAEIRD PQSKERRWLG TFDTAEDAAC AYDLAARAMR GLKARTNFVY PAPPPPSATD  120
TFLPPFNFPR QSRRPAKIPA NRHQFGAASG WSAFSNHRDG DHFPGSAAQK NSSLNMLLLR  180
DLLSSSSNPS LVSPTQPQGL DHEQLPCINV SSSSASAFSD CSLLNQSSNL NISQTFVSSS  240
MSLPPIDNNL ISYNCSTGVS NRTTAQQIHD FEFIPKESSD SGLLEEIIHG FFPKPSTKKC  300
ESPKTQTCTF DSGPPQISDM SIPQSLDEMK RGEKNEHLGF SFDYQEVPHQ LDNLRGVRRD  360
LFGMTQAAAV PFSYEIPAVN LHQVGGPESM LMDDLFQYQE PLSAFAARVH NA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-19521081471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018808292.10.0PREDICTED: ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2I4DMD60.0A0A2I4DMD6_JUGRE; ethylene-responsive transcription factor ESR2-like
STRINGEOY006421e-103(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.13e-14DORNROSCHEN-like