PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C017940P1
Common NameCMe-ERF2, LOC103494753
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family ERF
Protein Properties Length: 274aa    MW: 30927.4 Da    PI: 5.4826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C017940P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.3e-1968116355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  MELO3C017940P1  68 YRGIRQRP-WGKWAAEIRDPRK---GIRVWLGTFNTAEEAARAYDREARKIRG 116
                     9*******.**********954...3************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.81E-2267125IPR016177DNA-binding domain
SMARTSM003801.7E-3767130IPR001471AP2/ERF domain
PROSITE profilePS5103223.6767124IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-3267125IPR001471AP2/ERF domain
CDDcd000185.95E-3368125No hitNo description
PfamPF008471.1E-1168116IPR001471AP2/ERF domain
PRINTSPR003679.1E-126879IPR001471AP2/ERF domain
PRINTSPR003679.1E-1290106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MCGGAIIADL IPRRDGQRVT ASDIWPNSSF FHFNKIRSDQ VSTPLKRTPL PASSEASKPK  60
KRQRKNLYRG IRQRPWGKWA AEIRDPRKGI RVWLGTFNTA EEAARAYDRE ARKIRGKKAK  120
VNFPNEDDAY SIQAPIPQFH PHLYTVPENS EFPYDLNQIG DFTGTHFPVA IEEQSGSGSE  180
DSYSPPKRFG VKEAEDQKPE QKVSVIAAAE EENEVQKLSE ELMAYENYMK FYQIPYLDGQ  240
STVTNPAEEQ VVGDLWSFDD EDGLHGSVSS SEL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-21681261574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB1259760.0AB125976.1 Cucumis melo CMe-ERF2 mRNA for ERF-like protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001306244.10.0ethylene-responsive transcription factor ERF071
TrEMBLQ75UJ40.0Q75UJ4_CUCME; ERF-like protein
STRINGXP_008454315.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67713449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-34ethylene-responsive element binding protein