PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MELO3C010692P1
Organism
Cucumis melo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
Family ERF
Protein Properties Length: 360aa    MW: 40345.2 Da    PI: 6.6786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MELO3C010692P1genomeMELONOMICSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.5e-1970119255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa+a++ a+++++g
  MELO3C010692P1  70 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAARAYDCAARSMRG 119
                     59*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.77E-2170127IPR016177DNA-binding domain
SMARTSM003801.0E-3370133IPR001471AP2/ERF domain
PfamPF008471.3E-1270119IPR001471AP2/ERF domain
CDDcd000187.36E-3170126No hitNo description
PROSITE profilePS5103222.8470127IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.3E-3070126IPR001471AP2/ERF domain
PRINTSPR003674.1E-107182IPR001471AP2/ERF domain
PRINTSPR003674.1E-1093109IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEADSFRRVP IDNNNTSSNP FLDYQMKCNA TTPTTPTATT TTTTTTTTTT TSSSLKRTLR  60
DHNSSSGTMR YRGVRRRPWG RYAAEIRDPQ SKERRWLGTF DTAEEAARAY DCAARSMRGL  120
KARTNFVYPS SPPAPHSLSS DDYLIPRFNF PPKHSLPRLN SSNWPIFSTP NRGPDFLWSG  180
HAQRINTASP TLDMLLLRDF LNFPSSNYNH SSKPSYPINT TTTTTTNNNN SSTTKITPPP  240
PPENYSSEFL PKDSPDSGLL EEVIHGFFPK SHDSNNINNS DDYFNNNDEN KNANLSGHNL  300
DLLDYQLADE NFNNNNTALI NQDAPDHGRL FGDAHNLILD DIFQCPELLN PFPSKLQNA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-20701261471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6818230.0LN681823.1 Cucumis melo genomic scaffold, anchoredscaffold00014.
GenBankLN7132570.0LN713257.1 Cucumis melo genomic chromosome, chr_3.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008444372.10.0PREDICTED: ethylene-responsive transcription factor ESR1
TrEMBLA0A1S3BAY00.0A0A1S3BAY0_CUCME; ethylene-responsive transcription factor ESR1
STRINGXP_008444372.10.0(Cucumis melo)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12980.12e-16ERF family protein