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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_004509782.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
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Family | ERF | ||||||||
Protein Properties | Length: 281aa MW: 31907.3 Da PI: 7.1091 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 41 | 90 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g XP_004509782.1 41 RYRGVRRRP-WGRYAAEIRDP-----HskERRWLGTFDTAEEAACAYDCAARAMRG 90 59*******.**********6.....335999**********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 21.957 | 41 | 98 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.9E-21 | 41 | 98 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-29 | 41 | 97 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.9E-11 | 41 | 90 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.29E-31 | 41 | 97 | No hit | No description |
SMART | SM00380 | 2.3E-34 | 41 | 104 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-9 | 42 | 53 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-9 | 64 | 80 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence Send to blast |
MEQALRRLNG MSPTEHPNDH LTSYSAVPTN KTSGSPAGTI RYRGVRRRPW GRYAAEIRDP 60 HSKERRWLGT FDTAEEAACA YDCAARAMRG TKARTNFLYH PEPTENQNRF HPFNIPQHLH 120 VTNFNGADCF SPSSSSSTNF NPSLNNMVLF RDYLNNTCSY SNPFLVPSNF VQNKIDNVTI 180 SSSSASNFEK VSEEDIIIDD EESEIFPRES SGLLEEIVYK FMKNSKTTKS VSKFNNNNNN 240 EKKVKTEISH SHDNMFPVME GFGSVSYDHH EQGGMQLKLT M |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-19 | 42 | 97 | 3 | 59 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
5wx9_A | 2e-19 | 41 | 97 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_004509782.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027192650.1 | 0.0 | ethylene-responsive transcription factor ESR2-like | ||||
TrEMBL | A0A3Q7YGQ5 | 0.0 | A0A3Q7YGQ5_CICAR; ethylene-responsive transcription factor ESR2-like | ||||
STRING | XP_004509782.1 | 0.0 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4100 | 32 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 2e-14 | DORNROSCHEN-like |