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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
orange1.1g045963m |
| Common Name | CISIN_1g045963mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
ERF |
| Protein Properties |
Length: 197aa MW: 22222.3 Da PI: 8.8662 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| orange1.1g045963m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 55.6 | 1.3e-17 | 125 | 174 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r++ grW+AeIrdp+ r r++lg+f+t e Aa+a+++a+ +++g
orange1.1g045963m 125 KYRGIRQRQ-CGRWAAEIRDPR----RaVRVWLGTFDTDEAAARAYDRAAIEFRG 174
8*****999.7*********82....48************************997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001944 | Biological Process | vasculature development |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010200 | Biological Process | response to chitin |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:0051301 | Biological Process | cell division |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 197 aa
Download sequence Send
to blast |
MENSSRSSQL KALVNREEEH NVMVSTLKHV ITGHIIAIDE HQAATLSFSS NGKGMEENKQ 60
VSCTMAKLIL PDAVTCQVCE INGCLGCNLF PPSEEYCTTA TPGTSNENEV IIKNEKQKKK 120
KKKNKYRGIR QRQCGRWAAE IRDPRRAVRV WLGTFDTDEA AARAYDRAAI EFRGLKAKLN 180
FPLSDYIAKN YSEPEQR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Publications
? help Back to Top |
- Matsuo M,Oelmüller R
REDOX RESPONSIVE TRANSCRIPTION FACTOR1 is involved in age-dependent and systemic stress signaling.
Plant Signal Behav, 2015. 10(11): p. e1051279
[PMID:26479402] - Bertea CM,Narayana R,Agliassa C,Rodgers CT,Maffei ME
Geomagnetic Field (Gmf) and Plant Evolution: Investigating the Effects of Gmf Reversal on Arabidopsis thaliana Development and Gene Expression.
J Vis Exp, 2018.
[PMID:26649488] - Bahieldin A, et al.
Ethylene responsive transcription factor ERF109 retards PCD and improves salt tolerance in plant.
BMC Plant Biol., 2016. 16(1): p. 216
[PMID:27716054] - Huang D,Lin W,Deng B,Ren Y,Miao Y
Dual-Located WHIRLY1 Interacting with LHCA1 Alters Photochemical Activities of Photosystem I and Is Involved in Light Adaptation in Arabidopsis.
Int J Mol Sci, 2018.
[PMID:29112140] - Kong X, et al.
PHB3 Maintains Root Stem Cell Niche Identity through ROS-Responsive AP2/ERF Transcription Factors in Arabidopsis.
Cell Rep, 2018. 22(5): p. 1350-1363
[PMID:29386120]
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