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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
orange1.1g044766m |
Common Name | CISIN_1g044766mg, LOC102627868 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
LFY |
Protein Properties |
Length: 399aa MW: 44468.3 Da PI: 7.8355 |
Description |
LFY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g044766m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FLO_LFY | 637.3 | 2.4e-194 | 1 | 377 | 1 | 385 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseap.....leaaaaaaark..lr.....eleelfkayGvryltvakiaelGftvstLvd 80
mdpeaf+aslfkwdpr ++a+ppar++ e++ ++++ + aaaa++ +r +leelf+ayG+ry t+akiaelGftv+tL+d
orange1.1g044766m 1 MDPEAFTASLFKWDPRVVVAPPPARVQLEQVSQPPAvplgaA----AAAAYSalVRprelgGLEELFQAYGIRYHTAAKIAELGFTVNTLLD 88
9******************9***9999888776665443321....222222223366777******************************* PP
FLO_LFY 81 mkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet.aldalsqeglseepvqeekeaagsggeglgea 171
mkdeeld++m+sl ++fr++llvGeryGikaavraerrrl+e++ +rr++ls+d++t a+dalsqeglseepvq+ keaagsgg+g +
orange1.1g044766m 89 MKDEELDEMMNSLGHLFRWELLVGERYGIKAAVRAERRRLDEDD--LRRRHFLSSDTTTnAVDALSQEGLSEEPVQQDKEAAGSGGGG--PW 176
******************************************87..78888898887766************************9999..78 PP
FLO_LFY 172 elvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefL 263
e++ ++ kk++ +k r ++ d + e+e+d+de g+g +g+erqrehPfivtepgevargkknGLDYLf+LyeqCr+fL
orange1.1g044766m 177 EVAEKK--------KKQRGRKGPRP-----RKVVDVNLEDENDDDEYGGGCGGMERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFL 255
776544........23311111111.....2345777888899999********************************************** PP
FLO_LFY 264 lqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdi 355
+qvq+iakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdi
orange1.1g044766m 256 IQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDI 347
******************************************************************************************** PP
FLO_LFY 356 davfnahprLsiWYvPtkLrqLChlerska 385
da+fnahprL iWYvPt+LrqLCh+er+ a
orange1.1g044766m 348 DAIFNAHPRLGIWYVPTRLRQLCHAERNGA 377
***************************865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010077 | Biological Process | maintenance of inflorescence meristem identity |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0031490 | Molecular Function | chromatin DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MDPEAFTASL FKWDPRVVVA PPPARVQLEQ VSQPPAVPLG AAAAAAYSAL VRPRELGGLE 60 ELFQAYGIRY HTAAKIAELG FTVNTLLDMK DEELDEMMNS LGHLFRWELL VGERYGIKAA 120 VRAERRRLDE DDLRRRHFLS SDTTTNAVDA LSQEGLSEEP VQQDKEAAGS GGGGPWEVAE 180 KKKKQRGRKG PRPRKVVDVN LEDENDDDEY GGGCGGMERQ REHPFIVTEP GEVARGKKNG 240 LDYLFHLYEQ CRDFLIQVQN IAKERGEKCP TKVTNQVFRY AKKAGASYIN KPKMRHYVHC 300 YALHCLDEEA SNALRRAFKE RGENVGAWRQ ACYKPLVAIA ARQGWDIDAI FNAHPRLGIW 360 YVPTRLRQLC HAERNGAGAA ASSSVSAGAE HSVILKPY*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: In developing inflorescences, leaf primordia and very young leaves. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G61850.1 | 1e-149 | floral meristem identity control protein LEAFY (LFY) |