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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
orange1.1g025570m |
Common Name | CISIN_1g023996mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
NAC |
Protein Properties |
Length: 251aa MW: 28382.5 Da PI: 5.7689 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
orange1.1g025570m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 21.9 | 4.6e-07 | 4 | 28 | 1 | 25 |
NAM 1 lppGfrFhPtdeelvveyLkkkveg 25
lppG+rF Pt+eelv++yL +k+e+
orange1.1g025570m 4 LPPGYRFFPTEEELVSFYLINKLEE 28
79*******************9975 PP
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2 | NAM | 89.4 | 6.3e-28 | 33 | 111 | 50 | 128 |
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
k+++++++w+fF++r++++++g r++r+t+sgyWkatg+ v+s++++++g+kkt+vfykg+ap+g+kt+W mheyr+
orange1.1g025570m 33 KCQGDTEQWFFFTPRQEREERGGRPSRTTASGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMHEYRA 111
5667788**********************************************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MEELPPGYRF FPTEEELVSF YLINKLEELC GEKCQGDTEQ WFFFTPRQER EERGGRPSRT 60 TASGYWKATG SPSYVYSSDN RVIGVKKTMV FYKGKAPTGR KTKWKMHEYR AIEGASNPSS 120 AVIPKLRHEF SLCRIYVKSE SFRAFDRRPL EAARREEQPH GGGATTSAPN NIMVRGNGSN 180 TSFQDAIMCD GDVATTSAQN NIMGPRASSP ETSYSGEDHS DYPETNLDNN WNIVADPQPP 240 LWDWEQLNWP *
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-30 | 4 | 141 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-30 | 4 | 141 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-30 | 4 | 141 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-30 | 4 | 141 | 17 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
3swm_B | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
3swm_C | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
3swm_D | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
3swp_A | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
3swp_B | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
3swp_C | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
3swp_D | 2e-30 | 4 | 141 | 20 | 171 | NAC domain-containing protein 19 |
4dul_A | 2e-30 | 4 | 141 | 17 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-30 | 4 | 141 | 17 | 168 | NAC domain-containing protein 19 |
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