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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
mrna08317.1-v1.0-hybrid |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
G2-like |
Protein Properties |
Length: 514aa MW: 56209.5 Da PI: 5.7636 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
mrna08317.1-v1.0-hybrid | genome | GDR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 107.5 | 7.4e-34 | 287 | 341 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv++Lt++hvkSHLQkYR+
mrna08317.1-v1.0-hybrid 287 KPRMRWTPELHESFVEAVNQLGGSERATPKGVLKLMKVESLTIYHVKSHLQKYRT 341
79****************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 514 aa
Download sequence Send
to blast |
MEARPAIRRS TANSHMGVSG ALSSSTPVLQ SPSQETYPKL QDSQQVSMER SVVHAGHLTS 60 NSGVIGHIIS SPSRFSTDLH YSSISPREKQ SRKSPFISQS SSSASIPLSH SSPSEAFQST 120 ASCAYSKENS HSWGTDSLPG FLDFPVNTPV QNSQIESSSC SGIMAAADEW QEWASQLVTD 180 DDALTSNWSD LLVDDNVTNL EPKMTYQVPK PSLNFSAQQS LVSQQDPASS REPSLNFSAQ 240 QSQVSQQHPA SSTEIIPAPS REILPGQSKD IISVTTTPSS ANSAAAKPRM RWTPELHESF 300 VEAVNQLGGS ERATPKGVLK LMKVESLTIY HVKSHLQKYR TARYRPDSSE GSLEKKLTPL 360 EEMTSLDLKT GIEITEALRL QMEVQKRLHE QLEIQRNLQL RIEEQGKYLQ MMFEKQCKSS 420 IDNMNASSSG VENPSAQPSE AMQVSPDKSE LETSKVEHDK TKHDPAKSIV ASAECAEEPI 480 GKQKSPETEA PTDSEPDVCM SSSQPPKRPK IKE*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j4k_A | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 1e-30 | 286 | 345 | 1 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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