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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
model.Picochlorum_contig_223.g587.t1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Trebouxiophyceae incertae sedis; Picochlorum
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Family |
ERF |
Protein Properties |
Length: 236aa MW: 27022.5 Da PI: 10.25 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
model.Picochlorum_contig_223.g587.t1 | genome | Rutgers | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 35.2 | 3.1e-11 | 132 | 175 | 1 | 49 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49
s+++GV++ +++rW+A+ +++ng k slg f+++e Aa+a++++
model.Picochlorum_contig_223.g587.t1 132 SRFRGVHRTVSTKRWEAQ---FRKNG--KPTSLGCFDSEESAARAYDKM 175
789***************...88887..*******************86 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MDVAGSNLSV SSKAEENQHP TVDIHNFLED RLQKCLEKDI FALPLAYVRS ENPLVSQMKI 60 QDVQNRIQEH RHEVPSWDTW ESEKSRRESV TAHSVFAKLR PIESLSPRKV EPGLESPRLG 120 KTKSTSKRPF TSRFRGVHRT VSTKRWEAQF RKNGKPTSLG CFDSEESAAR AYDKMILWSE 180 LHGKAGAKPS VMNFDPEQYK QIAPWLQRIS QDGLLQALRR EGREEAARRT NDNKK*
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