PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00862_0040

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

HD-ZIP

Protein Properties

Length: 394aa MW: 41152.3 Da PI: 6.4378

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00862_0040	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.5	5.2e-14	85	139	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+R ++++ +e+Le Fe+++ +r+ LA++ g++++q+ +WFqNrRa+++ kfl00862_0040 85 RRRPKLSAAHVEALEGIFERDPAGAPGKRAALARQFGVSQQQIATWFQNRRARQR 139 789999***********************************************99 PP
2	HD-ZIP_I/II	72.9	6.2e-24	86	173	2	89
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 ++ +ls+ v++LE Fe++ p ++++lar+ g++++q+a WFqnrRAR +t+ql +d++ L++++ a +en++L+ e ++Lr+ kfl00862_0040 86 RRPKLSAAHVEALEGIFERDPAGAPGKRAALARQFGVSQQQIATWFQNRRARQRTRQLQHDFDLLRKCLRAAFTENQALKLELDDLRQ 173 6779**********************************************************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50071	15.775	81	141	IPR001356	Homeobox domain
SMART	SM00389	3.5E-10	83	145	IPR001356	Homeobox domain
SuperFamily	SSF46689	5.43E-14	83	151	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	2.2E-15	85	148	IPR009057	Homeodomain-like
Pfam	PF00046	2.2E-11	85	139	IPR001356	Homeobox domain
CDD	cd00086	1.61E-11	85	142	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence Send to blast
MVHLSSSSAT ASTPARPRAT RVKQEPTSLP LAQAAASPRA ACVTEDAYAR AAGLPSPSSA 60 VSPAGAWSVA CKQEDESADG GESARRRPKL SAAHVEALEG IFERDPAGAP GKRAALARQF 120 GVSQQQIATW FQNRRARQRT RQLQHDFDLL RKCLRAAFTE NQALKLELDD LRQAHAHCLL 180 PPSSPPAAPA VASASLPALR NLPAPFAPPQ PGSPEKRPRR TLSAPLLKRA RLSPAEPAPA 240 PLAAAPPHEA PLPALPVPFV LPTSTMPLPV VAAGSGGDEV HSGGARSACF PAAPEETTLD 300 EAFRDLLTSD PLDGGLGGMG HHSAPAPDLA WGGYAAQGDG AGAAEWGAME WEGEADSALE 360 GLLSAHALDP MFDLEAASQA CAREDLKMQA AWWH

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence Send to blast

MVHLSSSSAT ASTPARPRAT RVKQEPTSLP LAQAAASPRA ACVTEDAYAR AAGLPSPSSA  60
VSPAGAWSVA CKQEDESADG GESARRRPKL SAAHVEALEG IFERDPAGAP GKRAALARQF  120
GVSQQQIATW FQNRRARQRT RQLQHDFDLL RKCLRAAFTE NQALKLELDD LRQAHAHCLL  180
PPSSPPAAPA VASASLPALR NLPAPFAPPQ PGSPEKRPRR TLSAPLLKRA RLSPAEPAPA  240
PLAAAPPHEA PLPALPVPFV LPTSTMPLPV VAAGSGGDEV HSGGARSACF PAAPEETTLD  300
EAFRDLLTSD PLDGGLGGMG HHSAPAPDLA WGGYAAQGDG AGAAEWGAME WEGEADSALE  360
GLLSAHALDP MFDLEAASQA CAREDLKMQA AWWH

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1IQR6	0.0	A0A1Y1IQR6_KLENI; Homeobox domain-containing protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47370.1	1e-15	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein